CF834799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.427e-52 Identity = 96/149 (64.43%), Postives = 124/149 (83.22%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 464 ++K + LCDLY+++++TQ+VIF NTR KV++LT K+++ + TVSA H D+ Q+ RD IM EFRSGSSR+LI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D M+ +I+KFY+ IEE+P+N+ +L Sbjct: 246 DFKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQSDRDTIMNEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDEDVGMMREIEKFYSTQIEEMPANIGEL 394
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.427e-52 Identity = 98/136 (72.06%), Postives = 116/136 (85.29%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 413 + + +WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HGDM Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ Sbjct: 247 VEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIE 382
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.427e-52 Identity = 95/152 (62.50%), Postives = 122/152 (80.26%), Query Frame = 3 Query: 12 RYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 R +WK +TLCDLY+ L ITQ+VIF NT+ KV+WL D+M+ ++ TV A HGDM Q+ RD IM +FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKG AIN +T+DD L + +K+Y+ I+E+P N+ D++ Sbjct: 248 REDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNINDIM 399
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.862e-52 Identity = 96/150 (64.00%), Postives = 121/150 (80.67%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 +WK +TLCDLY+ L ITQ+VIF NT+ KV+WLTD+MR ++ TV A HGDM Q RD IM +FRSG+SRVLI+TD+ ARGIDVQQ+SLVINYDLP ENY+HRIGRSGRFGRKG AIN +T+ D L ++K+Y+ I+E+PSNV D++ Sbjct: 250 DWKFDTLCDLYDNLTITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLTKSDTIELKALEKYYSTKIKEMPSNVNDVM 399
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51 Identity = 96/154 (62.34%), Postives = 124/154 (80.52%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + +WK TLCD+Y++L ITQ+VIF NT++KVD LT++MR + TV++ HGDM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFV D R+L DI++FY+ I+E+P N A ++ Sbjct: 252 VEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51 Identity = 99/150 (66.00%), Postives = 123/150 (82.00%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 E+K E L DLY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 245 EYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51 Identity = 99/150 (66.00%), Postives = 123/150 (82.00%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 E+K E L DLY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 245 EYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51 Identity = 96/149 (64.43%), Postives = 123/149 (82.55%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 464 ++K + LCDLY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE+P+++ L Sbjct: 247 DYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50 Identity = 95/149 (63.76%), Postives = 124/149 (83.22%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 464 ++K + L DLY+++++TQ+VIF NTRRKV+ LT K+ + TVS+ + D+ Q RD+IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D + +I+KFY+ IEELP++VA++ Sbjct: 246 QYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMREIEKFYSTQIEELPADVAEM 394
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50 Identity = 95/149 (63.76%), Postives = 121/149 (81.21%), Query Frame = 3 Query: 18 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 464 ++K + LCDLY+++++TQ+VIF NTR KV++LT K++ + TVSA H D+ Q RD IM EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE+P+++ L Sbjct: 247 DYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREIEKFYSTQIEEMPADIGAL 395 The following BLAST results are available for this feature:
BLAST of CF834799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834799 ID=CF834799; Name=CF834799; organism=Citrus sinensis; type=EST; length=702bpback to top |