CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1296..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = -2 
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXED-IDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            +K+ GY++  G+ V +N WAI RD   W             +  +D +G ++  +PFGSGRRICPGI   + LV   L +L++ F W
Sbjct:  377 IKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNW 463
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C71AE_ARATH9.645e-1136.78Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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