CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1296..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.136e-14
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = -2
Query:   57 KISGYNVQKGSVVHVNVWAIGRDPADW---KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 314
            KI GY++   +++ VN WA+ RD A W    N           + +D KG D+ LLPFGSGRR+CP + LGI +V     +LL+ F W+
Sbjct:  377 KIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWS 465          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.320e-14
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            I GY +   + V +N WAIGRDP  W +             ID KG+ +  +PFG+GRR+CPG+  G+  +T  L  LL+HF W
Sbjct:  384 IDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNW 467          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.320e-14
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = -2
Query:   57 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 317
            ++I GY++ K + + ++ +AIGRDP  W N             I+ KG  Y LLPFG+GRR CPG+ LGI ++   L ++L++F W+
Sbjct:  381 IEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWS 467          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            +K+ GY++     + VNV AIGRDP  W N             +D +G  Y LLPFGSGRRICPG+ +GI  V   L +LL+ F W
Sbjct:  382 IKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDW 467          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = -2
Query:   57 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 317
            + I GY++ K +++ +N + IGRDP +W               I+ KG  + LLPFG+GRR+CPG+  GI +V   L  LL+ F W+
Sbjct:  377 INIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWS 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.590e-13
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VKI GY++   + + +N +AI RDP  W N             ID +G ++ LLPFGSGRRICPG+ +GI +V   L +LL+ F W
Sbjct:  378 VKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDW 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.590e-13
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = -2
Query:   57 VKISGY-NVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 317
            VK+ GY ++   +   +NVWAIGRDP  W+N            DIDMKG  + LLPFGSGRR CPG    I ++   L  L+H F +A
Sbjct:  385 VKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFA 472          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.076e-13
Identity = 37/85 (43.53%), Postives = 43/85 (50.59%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            KI GY +   S V VN WAIGRDP  W               +D KG+ +  LPFG GRRICPGI   +  +   L  LL HF W
Sbjct:  375 KIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDW 459          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.712e-13
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            +K+ GY++     + VNV AIGRDP  W N             +D +G  Y LLPFGSGRRICPG+ +GI  V   L +LL+ F W
Sbjct:  382 IKVQGYDIPPKRRILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDW 467          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.712e-13
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VKI GY++   + + +N+++I RDP  W N             ID +G ++ LLPFGSGRRICPG+ LGI  V   L +LL+ F W
Sbjct:  384 VKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDW 469          
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C83B1_ARATH7.136e-1440.45Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN9.320e-1440.48Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71B8_ARATH9.320e-1439.08Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71BK_ARATH1.217e-1344.19Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH1.217e-1337.93Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.590e-1343.02Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME1.590e-1344.32Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71DC_CATRO2.076e-1343.53Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BJ_ARATH2.712e-1344.19Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH2.712e-1343.02Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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