CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1296..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.030e-12
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++  Y++  G+ V +N WAIGR+ A W  +             +D +GH++ L+PFG+GRRICP I   + L+   L +L+H + W
Sbjct:  369 VRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDW 455          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.030e-12
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = -2
Query:   57 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 317
            VK+ GY++  G+ V +N W+I RDPA W  +             +D  G D   +PFGSGRRICPGI L + LV   L +L+  F W+
Sbjct:  376 VKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWS 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.346e-12
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = -2
Query:   66 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXE--DIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 311
            I GY+++KG+ +  N+W I RDP+ W +              D+D++G ++ LLPFGSGRR+C G+ LG+++V  +L + LH F
Sbjct:  419 IGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSF 502          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.346e-12
Identity = 37/89 (41.57%), Postives = 48/89 (53.93%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMK----GHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I GY++     V VN WAIGRDPA W+            +  D      G D+  LPFGSGRRICPG   G+  +  ML +L++HF W
Sbjct:  410 QIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDW 498          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDI-DMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            I G+ + K S V +N +AIGRDP  W +             + D KG ++  +PFGSGRR CPG+QLG+  +   + H+LH F W
Sbjct:  397 IDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTW 481          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +++GY +   + + +NVW++GR+P  W+               D  G D+  +PFG+GRRICPG+  G+  V   L  LL+HF W
Sbjct:  375 EVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDW 459          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +++GY +   + + +NVW++GR+P  W+               D  G D+  +PFG+GRRICPG+  G+  V   L  LL+HF W
Sbjct:  375 EVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDW 459          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXED---IDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            ++ G+++ K + + VN+WAIGRDP  W+N           E    ID +G+ + L+PFG+GRRIC G ++G   V  +LG L+H F W
Sbjct:  396 EVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDW 483          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.758e-12
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            ++GY +   + + +NVW++GR+P  W+               D  G+D+  +PFG+GRRICPG+  G+  V   L  LL+HF W
Sbjct:  377 VNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDW 460          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.114e-12
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXE---DIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            + GY++   + + VNVWAIGRDP  W+N                +D++G  Y LLPFGSGRR CPG  L + +V   L  L+  F W
Sbjct:  385 VCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQW 471          
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C71AM_ARATH1.030e-1235.63Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH1.030e-1240.91Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA1.346e-1239.29Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71C3_MAIZE1.346e-1241.57Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C84A1_ARATH1.758e-1240.00Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP1.758e-1235.29Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR1.758e-1235.29Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C75A6_CAMME1.758e-1239.77Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71DF_MENPI1.758e-1235.71Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C93A3_SOYBN5.114e-1240.23Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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