CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXE---DIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V + GY +   + + VNVWAIGRDP  W+N                +D++G  Y  +PFGSGRR CPG  L + +V   L  ++  F W
Sbjct:  375 VVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQW 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11
Identity = 33/87 (37.93%), Postives = 48/87 (55.17%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VK+  Y++  G+ V +N WAIGR+ A W  +             +D +G D  L+PFG+GRRICP I   + L   +L +L+H F W
Sbjct:  370 VKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDW 456          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VK+ GYN+  G+ V +N WAI RD A W  +             +D  G +   +PFGSGRRICPGI L + L    + +L+  F W
Sbjct:  376 VKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDW 462          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11
Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            I  Y + K   + VN W IGRDP  W +             +D +G+D+ L+PFG+GRRICPG+ +    +  ++   + +  W
Sbjct:  369 ILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDW 452          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.654e-11
Identity = 38/90 (42.22%), Postives = 43/90 (47.78%), Query Frame = -2
Query:   54 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMK----GHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 311
            I GY+V  G+   VN WAI RDP  WK+              D +    G D  L PFGSGRR CPG  LG   V   +  LLH F W P
Sbjct:  403 IDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVP 492          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = -2
Query:   66 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXED------IDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 311
            +  Y + + S++ VNVW+IGR+P  W N            +      +D++G  + LLPFGSGRR+CPG+ L +  V ++LG ++  F
Sbjct:  382 VENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCF 469          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 27/84 (32.14%), Postives = 43/84 (51.19%), Query Frame = -2
Query:   60 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 311
            I  Y + K   + VN W IGRDP  W +             +D +G+D+ L+PFG+GRRICPG+ +    +  ++   + +  W
Sbjct:  370 ILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDW 453          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW----KNXXXXXXXXXXXEDIDMKG--HDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V + GY + K ++V +N+WAIGRDP+ W                   ID+ G   D+ +LPFG+GRR CPG  + I  V   L  LLH F W
Sbjct:  397 VTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDW 488          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADW-KNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++  +++  G+ V +N WAIGR+ A W  +             +D +G  + L+PFGSGRRICP I   + L   +L +L+H F W
Sbjct:  368 VRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDW 454          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 37/84 (44.05%), Postives = 43/84 (51.19%), Query Frame = -2
Query:   66 ISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXED--IDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 311
            I GY V+KG+ +  N+  I  D   W N            D  IDMKG  + LLPFG GRRICPGI LG+  V   L   LH F
Sbjct:  397 IGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSF 480          
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C93A2_SOYBN3.315e-1137.08Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AO_ARATH3.315e-1137.93Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH3.315e-1139.08Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA4.329e-1132.14(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C78A3_SOYBN5.654e-1142.22Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C93B1_GLYEC7.385e-1135.23Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C80B2_ESCCA7.385e-1132.14(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C75A1_PINTA7.385e-1139.13Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AQ_ARATH7.385e-1135.63Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN9.645e-1144.05Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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