CF834823

Overview
NameCF834823
Unique NameCF834823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1068..1701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.228e-32
Identity = 72/179 (40.22%), Postives = 104/179 (58.10%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKE----DIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKP-EEIDMAGNPGQVTYMTTPLEVVATPRL 592
            + Q+E+  A    R++ E D   + YL+  +KESMR+HPP P +LPH +  D +INGY +P G+ V VN WA+ + P  W    EF PERFL++    ++DM G D R +PFG+GRRIC G    I  V  ML +L++H  W  PA+  +   ++DM+   G     T  L +V  PR+
Sbjct:  352 KLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLV--PRI 528          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32
Identity = 70/175 (40.00%), Postives = 106/175 (60.57%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVT-YMTTPLEVVATPR 589
            + +EE+++ +GP   +TE D Q L YLQ  +KE++RL    PL++PH    D K++G+++P  S + VN W +  +PA WK P EFRPERFL+E+  ++  G+D+R LPFG GRR CPGI L + ++   LG L+ +    P  G    +ID A   GQ + ++     +V  PR
Sbjct:  330 KVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTAEKGGQFSLHILKHSTIVCKPR 502          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32
Identity = 72/191 (37.70%), Postives = 104/191 (54.45%), Query Frame = 2
Query:   23 WRMGNGRARPQPIEGNKRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRL 592
            W M      P+ +E    AQ E+ +       + E +   L YL+  +KE+MRLHPP PL++P  +    +INGY +P  + + +N WAIG++P  W     F+PERFL   ID +G D+  +PFG+GRRICPGI   I  +   L  LL+H  W+ P K +K EE+DM  + G        L ++   RL
Sbjct:  323 WGMSELIRNPRVME---EAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNK-MKNEELDMTESNGITLRRQNDLCLIPITRL 509          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.346e-32
Identity = 66/174 (37.93%), Postives = 100/174 (57.47%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRL 592
            + + E+   VG  R + E+DF NL YL+  VKE++RLHPPTPL+LP +A     I  Y +PK   + VN W IG+ P  W +P+ F PERFL   +D +G+D+ L+PFG+GRRICPG+ +    +  ++   + +L W  P  G+  + + +    G       PL +V   R+
Sbjct:  316 KIRSEIQTVVG-ERSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLP-NGMSVDHLIVEEKFGLTLQKEPPLFIVPKSRV 487          

HSP 2 Score: 22.3274 bits (46), Expect = 4.346e-32
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 3
Query:   21 TGEWAMAELGPNP*RATKELR 83
            T EWAM EL  NP + T ++R
Sbjct:  299 TIEWAMTELTKNP-KITAKIR 318          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 5.506e-32
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADW-KNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVAT 583
            R QEE+         ++E D Q++ YL+  +KE++RLHPP PLM+PH++  DVK+  Y++P G+ V +N WAIG+  A W  +  EFRPER L   +D +G D  L+PFG+GRRICP I   + L   +L +L+H   W  P +  +  + D+A + G   +   PL  + T
Sbjct:  318 RLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTE-YQTDVAESTGMAVHRMFPLFAMTT 488          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.658e-32
Identity = 65/171 (38.01%), Postives = 104/171 (60.82%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRV-MTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVV 577
            K+ Q+E+   +G  +  + E D   L YL+  +KE++RLHP  PL+LP +  AD+KI GY++P+ +++ V+ W++G+ P  WKNP EF PERF+   +D KGH +  LPFGSGRR CPG+   I  +   L +LL+   W+ P    + ++++M  +         PLE++
Sbjct:  329 KKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPE---EMKDMNMEESGDVTIVKKVPLELL 496          

HSP 2 Score: 21.557 bits (44), Expect = 5.658e-32
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3
Query:   18 ITGEWAMAELGPNP 59
            IT  WAMAEL  NP
Sbjct:  312 ITMIWAMAELVNNP 325          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.191e-32
Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  116 VMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKE----DIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKG 502
            ++ E D  ++ YL+  +KE++RLHPP P +LPH + AD +I+GY VP G+ V V+ WA+G+    W+ P EF PERF++E    D+ MKG D R +PFGSGRRICPG+  G   +  ML +L++H  W  P  G
Sbjct:  376 MLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSG 509          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.191e-32
Identity = 66/173 (38.15%), Postives = 105/173 (60.69%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADW-KNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVAT 583
            KR QEE+         ++E + QN+ YL+  +KE++RLHPP PLM+PH++  DV++  +++P G+ V +N WAIG+  A W  +  EFRPER L   +D +G  + L+PFGSGRRICP I   + L   +L +L+H   WR   +  + ++ ++A + G   +   PL  +A+
Sbjct:  315 KRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTE-DQTEVAESTGIAIHRMFPLYAIAS 486          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31
Identity = 69/175 (39.43%), Postives = 107/175 (61.14%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVT-YMTTPLEVVATPR 589
            + +EE+++ +GP   +TE D   L YLQ  +KE++RL    PL++PH    D K+NG+++P  S + VN W +  +PA WK P EFRPERFL+E+  ++  G+D+R LPFG GRR CPGI L + ++   +G L+ ++   P  G    +ID +   GQ + ++     +VA PR
Sbjct:  332 KVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPG--QSKIDTSEKGGQFSLHILKHSTIVAKPR 504          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31
Identity = 62/140 (44.29%), Postives = 98/140 (70.00%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKED------IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLL 472
            ++ +EE++  VG +R++ E+D  NL YLQ  +KE+ RLHPP P M+  +  A+  +  Y +P+ S++ VNVW+IG++P  W NP+EFRPERFLK +      +D++G  ++LLPFGSGRR+CPG+ L +  V ++LG ++
Sbjct:  328 QKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVP-MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAII 466          
The following BLAST results are available for this feature:
BLAST of CF834823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
C71C1_MAIZE3.228e-3240.22Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
TCMO_CICAR4.216e-3240.00Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C71DA_SOYBN4.216e-3237.70Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C80B1_ESCCA4.346e-3237.93(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71AO_ARATH5.506e-3239.53Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH5.658e-3238.01Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71C2_MAIZE7.191e-3246.27Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71AQ_ARATH7.191e-3238.15Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
TCMO_MEDSA1.602e-3139.43Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C93B1_GLYEC1.602e-3144.29Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834823 ID=CF834823; Name=CF834823; organism=Citrus sinensis; type=EST; length=634bp
GGCATGGACACCTTTTAATAACTGGAGAATGGGCAATGGCAGAGCTCGGC
CCCAACCCATAGAGGGCAACAAAAGAGCTCAGGAAGAACTAAACCAAGCA
GTAGGCCCTAATCGCGTCATGACAGAAGCAGACTTTCAAAACCTGCACTA
TCTCCAGTGCGAGGTCAAAGAATCAATGCGGCTACACCCACCAACGCCTC
TAATGCTGCCCCACAAAGCCAACGCCGATGTAAAAATCAACGGCTACAAC
GTCCCGAAAGGATCAGTCGTACATGTAAACGTTTGGGCCATAGGCAAACA
CCCTGCTGATTGGAAAAACCCGATGGAATTTAGGCCTGAGAGGTTCTTAA
AGGAGGACATTGACATGAAAGGACACGATTATCGATTGTTACCATTTGGT
TCGGGGAGAAGAATTTGTCCCGGCATACAACTTGGCATAAATTTAGTGAC
CTCCATGTTGGGTCATCTTTTGCACCATTTGTGGAGGGCACCGGCTAAAG
GAGTGAAGCCTGAGGAAATTGATATGGCCGGGAACCCTGGACAGGTCACG
TACATGACCACACCCCTTGAGGTTGTGGCTACCCCGCGGTTGGCTGATCA
TGGCCTGTACAAGCGTGACCTTGTGGACATGTGA
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