CF834823

Overview
NameCF834823
Unique NameCF834823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1068..1701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31
Identity = 68/172 (39.53%), Postives = 107/172 (62.21%), Query Frame = 2
Query:   71 KRAQEELNQAVGP--NRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADW-KNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVV 577
            K+AQ E+ + +    +  +TE D +NL Y +  VKE++R+ P  PL++P     D KI GY++P G+ V+VN WA+ +   +W  NP EFRPERFL++++D KG DY  +PFGSGRR+CPG++LG  ++     +LL         G+KP++I+M    G   + +  L++V
Sbjct:  324 KKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV 495          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31
Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRV-MTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVV 577
            K+ Q E+ + +G N+  +TE D   + YL+  +KE+ RLHP  PL+LP +  A +K+ GY++P    + VNV AIG+ P  W NP EF PERF+   +D +G  Y LLPFGSGRRICPG+ +GI  V   L +LL+   W+ P  G+  ++ID             PL++V
Sbjct:  328 KKVQGEIREQLGSNKARITEEDIDKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLP-DGMTHKDIDTEEAGTLTIVKKVPLQLV 497          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNR---VMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDID----MKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAP 493
            K+ Q E+ +A G  +   ++ E D  +L YL+  +KE++RLHPP PL+LPH + AD +I+GY++P    V VN WAIG+ PA W+ P EF PERF+++  D      G D+R LPFGSGRRICPG   G+  +  ML +L++H  W  P
Sbjct:  354 KKLQAEV-RAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVP 501          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRV-MTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEID 523
            K  Q E+  + G N+  +T+ D   + +L   +KE+ RLHP  PL+LP +    +K+ GY++P    + VN WAIG+ P  W NP EF PERF+   +D +G  + LLPFGSGRRICPG+ LGI +V   L +LL+   WRAP  G+  ++ID
Sbjct:  328 KNVQGEIRDSFGNNKERITKEDLNKVPFLNMVIKETFRLHPVAPLLLPRETMTHIKVQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAP-DGMTHKDID 479          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 73/177 (41.24%), Postives = 105/177 (59.32%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRV-MTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDM--AGNPGQVTYMTTPLEVVATPR 589
            K+AQE +   +G  +  +TE D   + YL   +KE+ RLHP  P ++P +  + +KI GY++P  + + +NVW IG+ P  W +P EF PERF    +D +G  + LLPFGSGRRICPG+ + I  V   L +LL++  W  P  G K E+IDM  AGN   V  +  PL++V   R
Sbjct:  328 KKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMP-DGTKGEDIDMEEAGNISIVKKI--PLQLVPVQR 501          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 72/179 (40.22%), Postives = 105/179 (58.66%), Query Frame = 2
Query:   62 EGNKRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVT-YMTTPLEVVATPR 589
            E  K+ + EL+  +GP   +TE D   L YL   VKE++RL    PL++PH    D K+ G+++P  S + VN W +  +PA WKNP EFRPERFL+E+  ++  G+D+R LPFG GRR CPGI L + ++   LG L+ +    P  G    +ID +   GQ + ++     +VA PR
Sbjct:  327 EIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSKIDTSEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 71/179 (39.66%), Postives = 106/179 (59.22%), Query Frame = 2
Query:   62 EGNKRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVT-YMTTPLEVVATPR 589
            E  ++ ++E+++ +G    +TE D Q L YLQ  VKE++RL    PL++PH    D K+ GY++P  S + VN W +  +PA WK P EFRPERF +E+  ++  G+D+R LPFG GRR CPGI L + ++   LG L+ +    P  G    +ID +   GQ + ++     VVA PR
Sbjct:  327 EIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG--QSQIDTSEKGGQFSLHILKHSTVVAKPR 503          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 75/177 (42.37%), Postives = 98/177 (55.37%), Query Frame = 2
Query:   71 KRAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFL--KEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHLWRAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRLA 595
            ++ + EL+  VG  R + E+D   L YLQ  VKE++RL+PP PL  P +   D  I GY V KG+ +  N+  I      W NP+EF+PERFL   +DIDMKG  ++LLPFG GRRICPGI LG+  V   L   LH            E +DM           TPLE++  PRL+
Sbjct:  342 EKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSF---EILNPSTEPLDMTEVFRATNTKATPLEILIKPRLS 515          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPG 541
            + Q E+ +A+    V+  ++ Q L YL+  +KE++RLHPP PL +P ++  + ++NGY +P  + + +NVWAIG+ P  W++P  FRPERF +   D  G+D+  +PFG+GRRICPG+  G+  V   L  LL+H  W+ P +G+   ++DM   PG
Sbjct:  323 KVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLP-QGMTDADLDMTETPG 477          
BLAST of CF834823 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 2
Query:   74 RAQEELNQAVGPNRVMTEADFQNLHYLQCEVKESMRLHPPTPLMLPHKANADVKINGYNVPKGSVVHVNVWAIGKHPADWKNPMEFRPERFLKEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHL-WRAPAKGVKPEEIDMAGNPG 541
            + Q E+ +A+    V+  ++ Q L YL+  +KE++RLHPP PL +P ++  + ++NGY +P  + + +NVWAIG+ P  W++P  FRPERF +   D  G+D+  +PFG+GRRICPG+  G+  V   L  LL+H  W+ P +G+   ++DM   PG
Sbjct:  323 KVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLP-QGMTDADLDMTETPG 477          
The following BLAST results are available for this feature:
BLAST of CF834823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
C83A1_ARATH1.602e-3139.53Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BK_ARATH1.602e-3141.52Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE2.092e-3145.64Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BG_ARATH2.092e-3143.79Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH2.092e-3141.24Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPTM3.569e-3140.22Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PHAAU3.569e-3139.66Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C82A2_SOYBN3.569e-3142.37Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71DI_MENSP3.569e-3140.13Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.569e-3140.13Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834823 ID=CF834823; Name=CF834823; organism=Citrus sinensis; type=EST; length=634bp
GGCATGGACACCTTTTAATAACTGGAGAATGGGCAATGGCAGAGCTCGGC
CCCAACCCATAGAGGGCAACAAAAGAGCTCAGGAAGAACTAAACCAAGCA
GTAGGCCCTAATCGCGTCATGACAGAAGCAGACTTTCAAAACCTGCACTA
TCTCCAGTGCGAGGTCAAAGAATCAATGCGGCTACACCCACCAACGCCTC
TAATGCTGCCCCACAAAGCCAACGCCGATGTAAAAATCAACGGCTACAAC
GTCCCGAAAGGATCAGTCGTACATGTAAACGTTTGGGCCATAGGCAAACA
CCCTGCTGATTGGAAAAACCCGATGGAATTTAGGCCTGAGAGGTTCTTAA
AGGAGGACATTGACATGAAAGGACACGATTATCGATTGTTACCATTTGGT
TCGGGGAGAAGAATTTGTCCCGGCATACAACTTGGCATAAATTTAGTGAC
CTCCATGTTGGGTCATCTTTTGCACCATTTGTGGAGGGCACCGGCTAAAG
GAGTGAAGCCTGAGGAAATTGATATGGCCGGGAACCCTGGACAGGTCACG
TACATGACCACACCCCTTGAGGTTGTGGCTACCCCGCGGTTGGCTGATCA
TGGCCTGTACAAGCGTGACCTTGTGGACATGTGA
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