CF834828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834828 vs. ExPASy Swiss-Prot
Match: NDUS1_RAT (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.612e-25 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = -1 Query: 249 VILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDE-------RAPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 617 VILP +A++EK TY NTEG QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ + + L + E ++ L P +++FYMTDSI+RAS+TMA+C Sbjct: 582 VILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLGEVSPNLVRYDDVEEANYFQQASELAKLVDQEFLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
BLAST of CF834828 vs. ExPASy Swiss-Prot
Match: NDUS1_NEUCR (NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-78 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = -1 Query: 243 VILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDERAPATLGPSLKPEIKSE-----MDLTPFGSAVENFYMTDSITRASKTMAQCSA 617 ++LP +A++EK GTY NTEG Q T A G AR DWKI+RA+SE G+RLPYD + +R R+ ++P L D P +L K ++ + P +ENFY TD+I+R+S TMA+CSA Sbjct: 586 IVLPGAAYTEKAGTYVNTEGRVQMTRAATGLPGAARTDWKILRAVSEYLGVRLPYDDVAQLRDRMVEISPALSSYDIIEPPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSA 715
BLAST of CF834828 vs. ExPASy Swiss-Prot
Match: NDUS1_DROME (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Drosophila melanogaster GN=ND75 PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 228 ILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDERAPA----TLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLKK 614 +LP +A++EK+G Y NTEG QQTLP V G AR+DWKI+RALSEV G LPYD + +R+R+ VAP+L + + PA G K +D+ + +++MTD+I+RAS TMA+C + + K+ Sbjct: 589 VLPGAAYTEKQGIYVNTEGRPQQTLPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTRLGQLEPAGDAGAAGTISKSIGGGAIDIKL--KELRDYFMTDAISRASPTMAKCISAVNKQ 719
BLAST of CF834828 vs. ExPASy Swiss-Prot
Match: NDUS1_RECAM (NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas americana GN=NAD11 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = -1 Query: 240 VILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVD--ERAPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAM 617 VILP SA++EK TY N EG Q T A G+AR+DWKIIRALSEV +LPYD+ I +R ++AP+LL V+ E+ + SL K + F NFY+T++I R+S+TMA+CS++ Sbjct: 562 VILPGSAYTEKTATYVNVEGRVQNTKSAFYAPGNAREDWKIIRALSEVLNKKLPYDSFEDIHTRFMSIAPHLLKVNAIEKNKIVIENSL--PFKGLIKNIGFKPLFNNFYLTNAICRSSQTMAKCSSI 687
BLAST of CF834828 vs. ExPASy Swiss-Prot
Match: NQO3_PARDE (NADH-quinone oxidoreductase chain 3 OS=Paracoccus denitrificans GN=nqo3 PE=1 SV=4) HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13 Identity = 40/126 (31.75%), Postives = 71/126 (56.35%), Query Frame = -1 Query: 240 VILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDERAPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAM 617 +ILP + ++E+ G + NTEG Q + A G+ +++W I+RALS G P+D++ G+R ++ P+L +D+ P +P + ++ F A+ +FY+T+ I R+S M + SAM Sbjct: 539 IILPGACYTEESGLFVNTEGRPQLAMRANFAPGEGKENWAILRALSAELGATQPWDSLAGLRRKLVEAVPHLAQIDQ-VPQN---EWQPLGRFDLGQASFRYAIRDFYLTNPIARSSPLMGELSAM 660 The following BLAST results are available for this feature:
BLAST of CF834828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834828 ID=CF834828; Name=CF834828; organism=Citrus sinensis; type=EST; length=617bpback to top |