CF834833

Overview
NameCF834833
Unique NameCF834833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11237 contig Csv1_Contig11237:309..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = -2
Query:  104 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESF--ENNKLNGPELQGLVPYD 457
            ++ L+L  N ++G +P ++G ++ +  +++  NKL GE+P     L  L FL L+NN   G IP +L   S +  F+VS N L G IP D   RS+P  SF   N+KL+   L G +P D
Sbjct:  470 MELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLP--SQMVGFNVSYNDLSGIIPED--LRSYPPSSFYPGNSKLS---LPGRIPAD 582          

HSP 2 Score: 67.0106 bits (162), Expect = 7.074e-11
Identity = 41/136 (30.15%), Postives = 78/136 (57.35%), Query Frame = -2
Query:  134 LDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTG--SIPRE-LTTLSD-LKVFDVSNNGLCGTIPVD---GPFRSFPMESFENNKLNG 520
            LDL ++   G     + +L  L +L L  N   G  P    NL+ L S+D+++N++ G++ + F  LK+++F+ L+ N+  G  S+P E ++++S+ L+  ++S+N L G    +   G F++  +   ENN++NG
Sbjct:  128 LDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNGGLSLPMENISSISNTLRHLNLSHNALNGKFFSEESIGSFKNLEIVDLENNQING 263          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = -2
Query:  110 LDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPEL-----QGLVP 520
            L L  + ++G+   ++G    L+ L L  N  SG+IP+ L +L +LV +++ +N+  GEI   F NL  LK L L NNKL+GS+   L     L  F+VSNN L G+IP     + F  +SF    L G  L     +G VP
Sbjct:  100 LSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL---LDLDLSLDQFNVSNNLLNGSIPKS--LQKFDSDSFVGTSLCGKPLVVCSNEGTVP 236          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = -2
Query:  134 NNHVIRLDLGNSNISGTWGPEVG-------------------------QLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLS-DLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 538
            N+ V  L + +  ISG   PEVG                         +L++L +L L   +++G +P+ L  LK+L  +D+  N L G IP S ++L+ L++L L+ NKLTG IP    T S  +    +S+N L GTIP       F       NKL G
Sbjct:   69 NHRVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQG 229          

HSP 2 Score: 68.1662 bits (165), Expect = 3.175e-11
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = -2
Query:   98 DISGKIPKELGNLKSLVSMDMYQ-NKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGLVPYDFG 430
            +ISG+IP E+G+L  L S+   +   L G I  + A LK+L FLRL+   LTG +P  L+ L +L+  D+S N L G+IP      R         NKL GP     +P  FG
Sbjct:   81 EISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGP-----IPESFG 188          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13
Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  122 LDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQ 520
            L L  + +SG+   ++    +L++L L  N  SG+IP+ L +L  LV +++  N   GEI   F NL  LK L L NN+L+GSIP +L     L  F+VSNN L G+IP +   + F  +SF    L G  L+
Sbjct:  102 LSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP-DLDL--PLVQFNVSNNSLNGSIPKN--LQRFESDSFLQTSLCGKPLK 229          

HSP 2 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = -2
Query:  134 VPCDSNNHVIRLDLGNSNISGTWGPEV-GQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP-VDGPFRSFPMESFENNKLNG 553
            V C+SN  V  L L    +SG     + G L  L+ L L +N +SG +PK+L    +L  + +  N+  GEIP+   +L  L  L L +N  TG I    T L+ LK   + NN L G+IP +D P   F   +  NN LNG
Sbjct:   67 VKCESNR-VTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIPDLDLPLVQF---NVSNNSLNG 204          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = -2
Query:  194 LDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 520
            +DL  + ++GT    + Q+  L+ L +  N +SG  P +LG++ +L  +++  N   G +P++  NL+SLK L L+ N  TG IP  L+ L +L  F +  N L G IP
Sbjct:  119 IDLSRNFLNGTIPTTLSQIP-LEILSVIGNRLSGPFPPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIP 226          

HSP 2 Score: 69.3218 bits (168), Expect = 1.425e-11
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  194 LGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 514
            +GN  +SG + P++G +  L  + L  N  +G +P+ LGNL+SL  + +  N   G+IP+S +NLK+L   R++ N L+G IP  +   + L+  D+    + G IP
Sbjct:  145 IGN-RLSGPFPPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIPDFIGNWTLLERLDLQGTSMEGPIP 250          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = -2
Query:   98 DSNNHVIRLDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANL-KSLKFLRLNNNKLTGSIPREL---TTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVPYDFG 544
            DS+ H++ L L ++N++G+   E+G+   LQ + L +N +SG IP ELG   SL  +D+  N L G +P S  NL   L   +++ N L+G +P      +T  +L+V D+  N   G  P +   R   ++S +   L+    +GLVP   G
Sbjct:   96 DSSLHLLSLQLPSANLTGSLPREIGEFSMLQSVFLNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFP-EFITRFKGVKSLD---LSSNVFEGLVPEGLG 244          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  134 NISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPREL-TTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 502
            N++G   P + +L+ L+ L L   ++SG +P  L  LK+L  +D+  N L G IP S + L +L  LRL+ NKLTG IP      + ++    +S+N L G IP       F       NKL G
Sbjct:  106 NLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEG 229          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = -2
Query:  194 LDLGNSNISGTWGPEVGQLQHLQYLELYMND-ISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPREL-TTLSDLKVFDVSNNGLCGTIP 520
            L+LG++ ++G   P +G+L  L  L+L  N  +  +IP  LG L  L  + ++++   GEIP SF  L SL+ L L+ N L+G IPR L  +L +L   DVS N L G+ P
Sbjct:  176 LNLGSNLLTGIVPPAIGKLSELVVLDLSENSYLVSEIPSFLGKLDKLEQLLLHRSGFHGEIPTSFVGLTSLRTLDLSLNNLSGEIPRSLGPSLKNLVSLDVSQNKLSGSFP 286          

HSP 2 Score: 69.3218 bits (168), Expect = 1.425e-11
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  194 RLDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 523
            +     +  SG   P       L  + +  N + GKIP EL N K LVS+ +  N   GEIP S A+L  L +L L++N LTG IP+ L  L  L +F+VS NGL G +P
Sbjct:  393 KFSASQNRFSGELPPNFCDSPVLSIVNISHNRLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNLK-LALFNVSFNGLSGEVP 500          

HSP 3 Score: 67.3958 bits (163), Expect = 5.417e-11
Identity = 38/137 (27.74%), Postives = 66/137 (48.18%), Query Frame = -2
Query:  134 SNNHVIRLDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNG 541
            S  +++ LD+  + +SG++   +   + L  L L+ N   G +P  +G   SL  + +  N   GE P     L  +K +R +NN+ TG +P  ++  S L+  ++ NN   G IP   G  +S    S   N+ +G
Sbjct:  267 SLKNLVSLDVSQNKLSGSFPSGICSGKRLINLSLHSNFFEGSLPNSIGECLSLERLQVQNNGFSGEFPVVLWKLPRIKIIRADNNRFTGQVPESVSLASALEQVEIVNNSFSGEIPHGLGLVKSLYKFSASQNRFSG 403          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 38/112 (33.93%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  188 RLDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 523
            +LDL  ++ +G        L++L  L++  N ++G IP  LG L  L+ ++   N     IP    +L +L    L+ N L+GS+P+EL  LS L++  + +N L GT+PVD
Sbjct:  180 QLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVD 291          

HSP 2 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = -2
Query:  194 LDLGNSNISGTWGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 520
            LDL + +++G     +G L  L+ L L  N ++  +P  LG L +L  +D+ +N   G +P+SF++LK+L  L +++N LTG IP  L  LS L   + S+N     IP
Sbjct:  133 LDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIP 241          
BLAST of CF834833 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  134 LQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 466
            L +LQ+L +   ++SG IP  L  ++SL S+D+  N L G IP SF++L +L+ L L +NKLTG IP  L      +   +S N L G IP D            +N+L G
Sbjct:  119 LSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPRDDAQDEINTVDLSHNRLTG 228          
The following BLAST results are available for this feature:
BLAST of CF834833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
Y5020_ARATH5.787e-1337.50Probable inactive receptor kinase At5g10020 OS=Ara... [more]
RLK90_ARATH5.787e-1337.32Probable inactive receptor kinase RLK902 OS=Arabid... [more]
PGIP2_ARATH5.787e-1332.30Polygalacturonase inhibitor 2 OS=Arabidopsis thali... [more]
Y1848_ARATH9.871e-1338.35Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y5343_ARATH1.289e-1234.86Probable LRR receptor-like serine/threonine-protei... [more]
TMKL1_ARATH1.289e-1232.68Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
PGIP_PYRCO1.289e-1235.48Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]
Y5694_ARATH2.199e-1239.64Probably inactive leucine-rich repeat receptor-lik... [more]
Y2165_ARATH2.872e-1233.93Probable LRR receptor-like serine/threonine-protei... [more]
PGIP1_ORYSJ3.751e-1237.84Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834833 ID=CF834833; Name=CF834833; organism=Citrus sinensis; type=EST; length=560bp
TCGATAAGCTGATGCACACAATATAATTTTACCCTATACGAGTCTTTAAC
ATTATGGTCCTCAATAGAAGACGGAGGGTTTTCAACCTTCTTCAGCATCC
AAAATCATAAGGCACCAGTCCTTGCAGCTCTGGTCCATTGAGTTTATTAT
TTTCAAAACTCTCCATAGGAAAGCTTCTAAAAGGACCATCAACAGGGATT
GTCCCACAGAGACCATTGTTAGAAACATCAAAAACTTTGAGGTCCGACAG
GGTGGTCAGCTCCCTCGGAATTGATCCTGTTAGTTTGTTGTTGTTCAACC
GCAGAAATTTAAGTGACTTCAAATTGGCAAAGGACTTTGGTATTTCTCCT
TCCAGTTTATTCTGATACATATCCATGCTGACAAGGCTTTTCAAATTACC
TAACTCTTTCGGAATTTTCCCACTTATGTCATTCATGTAAAGCTCCAAGT
ACTGCAGATGCTGGAGCTGGCCAACCTCAGGCCCCCAAGTTCCAGAAATA
TTAGAGTTACCCAAGTCCAAACGAATCACATGATTGTTGGAATCACAGGG
GACATGGAAC
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