CF834842

Overview
NameCF834842
Unique NameCF834842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 49/138 (35.51%), Postives = 80/138 (57.97%), Query Frame = 2
Query:   11 LYVWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKI---DEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLD 415
            L +WS GV+LY L CG LPFD   +P L +++  G + +P  +S     LI RML++DP KR++I +I++H W    +P    +  P   +    I   +E++L+ +  +G DQ + VESL+N+  N     Y+LL++
Sbjct:  198 LDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLSIAQIKEHKWMLIEVPVQRPILYPQEQENEPSIGEFNEQVLRLMHSLGIDQQKTVESLQNKSYNHFAAIYFLLVE 335          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN2_YEAST (Serine/threonine-protein kinase KIN2 OS=Saccharomyces cerevisiae GN=KIN2 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPW----FQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRF------------RVSSGYLGAEFQETM----------ESGFNRLHPIEPAVSPVAHRAPGFMDY---QGMGLRGQLPYERKWALGLQSRAHPREIMTEV 646
            +WS G++LY L CG +PFDDEN   L +KIK G    PSHLS     L+ RM++VDP++R T+  + +HPW    +    P Y+    P T +    ID ++LKE+ ++ F  +  +E  R  L    T   Y+ L   +             +++ YL +  Q+T+          +SG+N   P      P     P    Y     M  R     +R+ AL LQ++A  R+   +V
Sbjct:  306 IWSFGIVLYVLVCGKVPFDDENSSILHEKIKKGKVDYPSHLSIEVISLLTRMIVVDPLRRATLKNVVEHPWMNRGYDFKAPSYVPNRVPLTPEM---IDSQVLKEMYRLEFIDD--IEDTRRSLIRLVTEKEYIQLSQEYWDKLSNAKGLSSSLNNNYLNSTAQQTLIQNHITSNPSQSGYN--EPDSNFEDPTLAYHPLLSIYHLVSEMVARKLAKLQRRQALALQAQAQQRQQQQQV 537          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 50/151 (33.11%), Postives = 89/151 (58.94%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWF---------QAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGF--DQNQLVESLRNRLQNEATVAYYLLLDNRFRVSS 436
            VWSCGVIL+AL  G LPFDD+N+  L +K+K G++ +P  + P  + L+  M+ VD  +R+T+  I++H W+         +  +PR + +    ++   + ID ++L  +  +G   D+N+L++ L +  +N+  + Y+LLLD + R  S
Sbjct:  200 VWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVDAARRLTLEHIQKHIWYIGGKNEPEPEQPIPRKVQI---RSLPSLEDIDPDVLDSMHSLGCFRDRNKLLQDLLSEEENQEKMIYFLLLDRKERYPS 347          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 50/151 (33.11%), Postives = 89/151 (58.94%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWF---------QAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGF--DQNQLVESLRNRLQNEATVAYYLLLDNRFRVSS 436
            VWSCGVIL+AL  G LPFDD+N+  L +K+K G++ +P  + P  + L+  M+ VD  +R+T+  I++H W+         +  +PR + +    ++   + ID ++L  +  +G   D+N+L++ L +  +N+  + Y+LLLD + R  S
Sbjct:  199 VWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVDAARRLTLEHIQKHIWYIGGKNEPEPEQPIPRKVQI---RSLPSLEDIDPDVLDSMHSLGCFRDRNKLLQDLLSEEENQEKMIYFLLLDRKERYPS 346          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN1_SCHPO (Protein kinase kin1 OS=Schizosaccharomyces pombe GN=kin1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18
Identity = 58/172 (33.72%), Postives = 85/172 (49.42%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGAEFQETMESGF-----NRLHPIEPAVSP 517
            VWS G++LY L CG +PFDD+N+  L  KIK G    PS+LS   + L+ RML+ DP+KR T+ E+  HPW   +     A   P+       +D EI++E+   GFD     + +R   +  ++ AY  L    F     Y G    +  +S F     +  H IE  + P
Sbjct:  324 VWSFGIVLYVLVCGKVPFDDQNMSALHAKIKKGTVEYPSYLSSDCKGLLSRMLVTDPLKRATLEEVLNHPWMIRNYEGPPASFAPERSPITLPLDPEIIREM--NGFDFGPPEKIVRELTKVISSEAYQSLAKTGF-----YSGPNSADKKKSFFEFRIRHAAHDIENPILP 488          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN1_YEAST (Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae GN=KIN1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPW----FQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGAE 454
            VWS GV+L+ L CG +PFDDEN   L +KIK G    P HLS     L+ +ML+VDP +R T+ ++ +H W    F    P YL    P T++    +D  +LKE+ ++ F  +  VE  R+ L +  T   Y+LL  ++   +  + AE
Sbjct:  327 VWSFGVVLFVLVCGKVPFDDENSSVLHEKIKQGKVEYPQHLSIEVISLLSKMLVVDPKRRATLKQVVEHHWMVRGFNGPPPSYLPKRVPLTIEM---LDINVLKEMYRLEFIDD--VEETRSVLVSIITDPTYVLLSRQYWTLAAKMNAE 471          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: HSL1_YEAST (Probable serine/threonine-protein kinase HSL1 OS=Saccharomyces cerevisiae GN=HSL1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAH--LP--RYLAVPPPDTMQQAK----------------------KIDEEILK--EVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVS 433
            VWSCG++L+AL  G LPF+D+NI  L  K++ G Y +PS+LS  ARDLI ++L++DP KRIT  EI +HP  + +  LP  + L     D M + K                      +IDE IL+  +++  G  +  +   L  +  +E  + Y LLL  + R S
Sbjct:  298 VWSCGIVLFALLTGHLPFNDDNIKKLLLKVQSGKYQMPSNLSSEARDLISKILVIDPEKRITTQEILKHPLIKKYDDLPVNKVLRKMRKDNMARGKSNSDLHLLNNVSPSIVTLHSKGEIDESILRSLQILWHGVSRELITAKLLQKPMSEEKLFYSLLLQYKQRHS 464          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: PPK9_SCHPO (Protein kinase domain-containing protein ppk9 OS=Schizosaccharomyces pombe GN=ppk9 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVP 265
            VW CG++LY +  G  PF+D  I N+  ++  GIYT+PS +S  A DLI +ML+V P  RI + EI QHPWF A LP +  +P
Sbjct:  203 VWGCGILLYLMLVGEFPFEDVTISNVLSRVCKGIYTIPSFVSSSASDLIRQMLMVLPTSRIKVAEIMQHPWFIADLPTHSRLP 285          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLL 412
            VWS G++LY L CG LPFDD+N+  L+KKI  G Y +P  LSP +  L+ +ML VDP KRI++  +  HPW    +  Y       +      +DE+ + E+        Q +E L +  Q +   A YLLL
Sbjct:  192 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYEVPKWLSPSSILLLQQMLQVDPKKRISMRNLLNHPWV---MQDYSCPVEWQSKTPLTHLDEDCVTELSVHHRSSRQTMEDLISSWQYDHLTATYLLL 320          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQ-----AHLPRYLA-VPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGA 451
            +WS GV+LY L CG LPFD   + NL  ++  G + +P  +S     LI  ML++DP KR+++ +I +H W +      +  R +A        +Q   ++E++L  +  MG D+ Q ++SLR+   +  +  Y LL D   R  +  LGA
Sbjct:  188 IWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICKHKWMKLGDADPNFDRLIAECQQLKEERQVDPLNEDVLLAMEDMGLDKEQTLQSLRSDAYDHYSAIYSLLCDRHKRHKTLRLGA 338          
The following BLAST results are available for this feature:
BLAST of CF834842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
SIK2_MOUSE4.159e-2135.51Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]
KIN2_YEAST4.598e-2030.13Serine/threonine-protein kinase KIN2 OS=Saccharomy... [more]
BRSK2_MOUSE7.843e-2033.11BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
BRSK2_HUMAN7.843e-2033.11BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
KIN1_SCHPO4.304e-1833.72Protein kinase kin1 OS=Schizosaccharomyces pombe G... [more]
KIN1_YEAST5.621e-1836.67Serine/threonine protein kinase KIN1 OS=Saccharomy... [more]
HSL1_YEAST9.587e-1835.33Probable serine/threonine-protein kinase HSL1 OS=S... [more]
PPK9_SCHPO2.789e-1748.19Protein kinase domain-containing protein ppk9 OS=S... [more]
MELK_MOUSE4.758e-1737.88Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
SIK3_HUMAN6.214e-1732.45Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834842 ID=CF834842; Name=CF834842; organism=Citrus sinensis; type=EST; length=715bp
CTGGGCCTGACTTTATGTGTGGAGTTGTGGTGTTATATTGTATGCTCTTC
CCTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTTAAG
AAAATTAAGGGTGGGATATACACTCTGCCCAGTCATTTGTCTCCGGGTGC
AAGAGATTTGATCCCAAGGATGCTTATAGTTGATCCAATGAAACGAATCA
CCATTCCTGAGATACGTCAGCACCCATGGTTCCAAGCCCATCTTCCGCGT
TATTTAGCTGTGCCCCCTCCAGATACGATGCAACAAGCAAAAAAGATTGA
TGAGGAGATTCTTAAGGAAGTGGTTAAGATGGGATTTGACCAGAACCAAC
TGGTTGAATCTCTTCGCAATAGGTTACAAAACGAGGCTACTGTTGCATAC
TATTTGCTGTTGGACAACCGATTCCGTGTTTCCAGTGGCTACCTTGGAGC
CGAGTTTCAGGAAACTATGGAATCTGGTTTCAACCGTTTGCATCCCATTG
AACCTGCTGTATCACCTGTTGCACACCGTGCTCCAGGATTCATGGATTAT
CAAGGAATGGGTTTAAGAGGACAGTTGCCATATGAAAGGAAATGGGCTCT
TGGACTACAGTCTCGAGCCCATCCACGTGAAATAATGACAGAAGTTCTGA
AAGCTTTGCAAGAACTGAATGTGGGTTGGAAGAAGATTGGGCACTATAAC
ATGAAGTGCAGATGG
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