CF834844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 178 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 528 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 178 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 528 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 178 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 528 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 178 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKY 528 ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24 Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 E+ L DPP P ED+ Q +I GP +PYAGG+F + + D+P PPK F TK+FHPN++SNG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y S AR T+ +A Sbjct: 19 EVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24 Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 537 E+ L DPP P ED+ Q I GP +PYAGG+F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y S AR T +A G Sbjct: 19 EVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKY 495 EL L S SA PV + D+ +W I GP D+PY+G F VS+ FP +YPF PP + F + ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ D +Y Sbjct: 16 ELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQK 525 E K L +PP AGP+ E+ F W+A IMGP D+ + GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 12 EYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24 Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 522 E+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ +NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y + AR T+ Sbjct: 19 EVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24 Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 522 E+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ +NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y + AR T+ Sbjct: 19 EVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153 The following BLAST results are available for this feature:
BLAST of CF834844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834844 ID=CF834844; Name=CF834844; organism=Citrus sinensis; type=EST; length=693bpback to top |