CF834844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 477 ELK LQ++P V E D+++W+ I GPP++ Y GG F I FP DYP+ PP F TK++HPNI NG +C+ IL E+W+P + +LLS+ SLL +PN P + + M++ Sbjct: 16 ELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFR 149
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 E K +KD P A PV + D+ W+A I G + +AGGV+ +++ +P +YP KPPKV F +HPN+ +G+ICL IL E W PA+T+ +++L + LL PNP+ P + +KA+Y+ ++Y+ Sbjct: 12 ERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 127 DLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 D+ K + V +D+ + T GP DS Y GGV+ + + P YP+K P V F K++HPN++ S+G++CLD++ + WSP + V S + LL PNP DP E A + D+A YE + + +KYA Sbjct: 11 DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 477 ELK LQ++P V E D+++W+ I GPP++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ Sbjct: 16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYR 149
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 477 ELK LQ++P V E D+++W+ I GPP++ Y GG F + FP DYP+ PP F TK++HPNI G +C+ IL E+W+P + +LLS+ SLL +PN P + + MY+ Sbjct: 16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYR 149
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 477 E + L ++P + +M W + GP D+ Y GG+F I FPP+YP++PP++ F ++++HPNI S+G +C+ IL +EQ WSP I +LLS+ SLL +PN D P + A Y+ Sbjct: 9 EYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYR 136
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 175 EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 E + W ++ P +PY G F + I+FPP YPF PPK+ F+TK++HPN++ G +CL I+ + W P +VL ++ +++ +P P+ PL ++A + + K+ TA +T+K A Sbjct: 30 ESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNA 148
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKA 489 EL L SA P ++++F W TI G + Y + +S+ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS + +LLSI SLL +PN D PL A ++K A Sbjct: 38 ELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 169 VAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 V E++F W+ I GP +S Y F + I DYP+ PKV F T + H N+N G ICL+ILK+ W+ +L I ++ SI LL PNP+DP E+A +Y+ DK Y+ R + + ++ Sbjct: 32 VDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHS 153
BLAST of CF834844 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 118 ELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 531 E K +KD P A PV ++F+W+ I G D+ + GG++ + + F D+P PPK F +FHPN+ +G++CL +L E W P+++I ++L+ I LL PN +DP E +Y ++A+YE + KYA Sbjct: 12 ERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156 The following BLAST results are available for this feature:
BLAST of CF834844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834844 ID=CF834844; Name=CF834844; organism=Citrus sinensis; type=EST; length=693bpback to top |