CF834854

Overview
NameCF834854
Unique NameCF834854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.150e-27
Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = -2
Query:   22 KPLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV-IADCGQL 384
            K   Y+GS+FHRVI  FM Q           G+SIYG KF DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AIE V    G   + VV I   G+L
Sbjct:   60 KGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 65/121 (53.72%), Postives = 74/121 (61.16%), Query Frame = -2
Query:   22 PLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 381
            PL YKGS FHRVI  FMCQ           GESIYG KF DENF  KH  P +LSMANAG  TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE      + +  K V I DCG L
Sbjct:   56 PLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCGVL 176          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.562e-27
Identity = 68/123 (55.28%), Postives = 77/123 (62.60%), Query Frame = -2
Query:   22 PLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 381
            PL YKGS FHRVI  FM Q           GESIYG KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V+EG  +V+ IEK  +  G T+KP   V +  CG L
Sbjct:   54 PLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDG-TDKPMHDVKVEGCGLL 175          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27
Identity = 67/123 (54.47%), Postives = 74/123 (60.16%), Query Frame = -2
Query:   22 PLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 381
            PL YKGS FHRVI  FMCQ           GESIY  KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE         NKP   V I DCG L
Sbjct:   54 PLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIEN-QQCDQENNKPLRDVKIDDCGVL 175          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.369e-27
Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = -2
Query:   22 KPLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEK--VGSSSGRTNKPVVIADCGQL 384
            KP+ YK S+FHR+I GFM Q             +I+ S+ F DENF  KH  PG+LSMANAG  +NG QFF+ T   ++LDGKHVVFG+V+EG D+VK IE   VG++S R    V I +CG++
Sbjct:   51 KPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGEM 173          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.369e-27
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = -2
Query:   22 PLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTNKPVVIADCGQL 381
            PL YKGS FHR+I GFMCQ           GESIYG+ F DE+F +KH   G+LSMAN GP T  SQFF+ T  T  LDGKHVVFG+VV G +VV+ +E +      R    V+IA+CG+L
Sbjct:   53 PLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.734e-27
Identity = 65/123 (52.85%), Postives = 77/123 (62.60%), Query Frame = -2
Query:   22 GKPLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 387
            GKPL YKGS+FHRVI  FM Q           GESIYG  F DE FV KH  P ++SMAN GP TNGSQFF+ T     L+  HVVFG+VV G +VV  IE + ++S  R    VVI +CG+L
Sbjct:   54 GKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL 176          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.660e-26
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = -2
Query:   85 GKPLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 387
            G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE
Sbjct:   55 GVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.832e-26
Identity = 63/118 (53.39%), Postives = 74/118 (62.71%), Query Frame = -2
Query:   22 YKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 372
            Y  S FHRVIP FM Q           G+SI+G+ F DENF  KH  PG LSMAN G  TNGSQFF+ T    WLDGKHVVFG+V++GMDVV  IE V + S     K V+I + G+L
Sbjct:   79 YLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDSRNMPVKEVIIVESGEL 196          
BLAST of CF834854 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.309e-26
Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = -2
Query:   22 PLPYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 381
            P  YK S FHR+I  FMCQ             SIYG KF DENF  KH   G+LSMAN+GPGTNG QFF+      +LDGKHVVFG+VV+G+  ++ +E V   +G  N+P   V I  CG++
Sbjct:   36 PEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENV--PTGANNRPKMAVRITQCGEM 156          
The following BLAST results are available for this feature:
BLAST of CF834854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PPIB_ASPOR1.150e-2754.10Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPID_KLULA1.961e-2753.72Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPID_CANGA2.562e-2755.28Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPID_YEAST3.345e-2754.47Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIH_SCHPO4.369e-2750.00Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
CYP11_RHIOR4.369e-2752.89Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
CYP1_BRUMA9.734e-2752.85Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPIH_MOUSE1.660e-2653.47Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
CYPD_YEAST2.832e-2653.39Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
PPIH_USTMA6.309e-2648.78Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834854 ID=CF834854; Name=CF834854; organism=Citrus sinensis; type=EST; length=388bp
TTATCATGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGG
GCTTGTTGGTCCTGCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACG
ACGTCCATCCCTTCGACGACCTGACCGAACACAACGTGCTTCCCATCGAG
CCACTCGGTCTTGGCCGTACAGACGAAGAACTGGGATCCGTTGGTTCCGG
GTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACG
AAGTTCTCATCGGCGAATTTCGAGCCGTAGATTGATTCGCCTCCGGTTCC
GTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACAC
GGTGGAAGGACGAGCCTTTGTAGGGGAGAGGCTTGCCG
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