CF834868

Overview
NameCF834868
Unique NameCF834868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2387 contig Csv1_Contig2387:233..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR2_MACFA (Pyrroline-5-carboxylate reductase 2 OS=Macaca fascicularis GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.047e-37
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPAY F+A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HP QLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  173 LSGSGPAYAFMALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPCQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          

HSP 2 Score: 60.4622 bits (145), Expect = 3.047e-37
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2
Query:  173 KKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            + ++VS AAGV +    K L  +    + IR M NTP  V E ATV ++G  A  EDG+L+ +L  SVG     +E L DA+TGL
Sbjct:   89 RHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVREGATVYAMGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGL 173          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR1_BOVIN (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Bos taurus GN=PYCR1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.970e-37
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPAY F A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HPGQLKD+V SPGG TI  +H LE  GFR +L+ AV A+  R+REL
Sbjct:  173 LSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHVLESGGFRSLLIKAVEASCTRTREL 268          

HSP 2 Score: 58.9214 bits (141), Expect = 3.970e-37
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 2
Query:  149 QIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG L+ +L  SVG     +E L DA+TGL
Sbjct:   81 EIAANIEARHIVVSCAAGVTISSIEKKLTAFQPAPKVIRCMTNTPVVVREGATVYATGTHAQVEDGRLLEQLMSSVGFCTEVEEDLIDAVTGL 173          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR2_HUMAN (Pyrroline-5-carboxylate reductase 2 OS=Homo sapiens GN=PYCR2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.171e-37
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPAY F+A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HP QLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  173 LSGSGPAYAFMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLLDSEQHPCQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          

HSP 2 Score: 59.3066 bits (142), Expect = 5.171e-37
Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 2
Query:  173 KKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGL
Sbjct:   89 RHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGL 173          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR1_MOUSE (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Mus musculus GN=Pycr1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.174e-37
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPAY F A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HP QLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  173 LSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPSQLKDNVCSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL 268          

HSP 2 Score: 59.3066 bits (142), Expect = 5.174e-37
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 2
Query:  173 KKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            + ++VS AAGV +    K L  +    + IR M NTP  V E  TV + G  A  EDG L+ +L GSVG     +E L DA+TGL
Sbjct:   89 RHIVVSCAAGVTINSIEKKLTAFQPAPKVIRCMTNTPVVVREGVTVYATGTHAQVEDGRLVEQLMGSVGFCTEVEEDLIDAVTGL 173          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR2_PONAB (Pyrroline-5-carboxylate reductase 2 OS=Pongo abelii GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.736e-37
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSGPAY F+A++ALADGGV  GLPR LA+ L +Q +LGAA M+  S +HP QLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  173 LSGSGPAYAFMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLLDSEQHPCQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          

HSP 2 Score: 58.9214 bits (141), Expect = 6.736e-37
Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 2
Query:  179 LLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGL
Sbjct:   91 IVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGL 173          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR_SYNY3 (Pyrroline-5-carboxylate reductase OS=Synechocystis sp. (strain PCC 6803) GN=proC PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.565e-35
Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 3
Query:  432 GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            GSGPAY+ L IEALADGGV AGLPR +A  LA QTVLG A ++ ++ +HP Q+KD V SPGGTTIAG+  LEK GFR  ++ AV AA +RS+EL
Sbjct:  171 GSGPAYVALMIEALADGGVLAGLPRAIAQKLALQTVLGTAELIKETEEHPAQIKDKVTSPGGTTIAGVAVLEKMGFRSAIIEAVRAAYRRSQEL 264          

HSP 2 Score: 52.373 bits (124), Expect = 3.565e-35
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 2
Query:  167 SRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            + + L++S+ AGV L+ +Q+       IR MPNTP+ VG   T ++       +       +F +VG +    E L DA+TG+
Sbjct:   87 ANRPLVISILAGVSLQRIQKGFPDHAIIRAMPNTPATVGAGMTAIAANKMVEPDQLAKAKAIFSAVGNVVEVPENLMDAVTGV 169          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR3_RAT (Pyrroline-5-carboxylate reductase 3 OS=Rattus norvegicus GN=Pycrl PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.581e-32
Identity = 50/97 (51.55%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 716
            L GSG A++    EALA+G +  G+P +LA  +A+QT+LG A M+ + GKHP QL+ DV +P GTTI G+H LE+ GFR   M+AV AA  R++ELS
Sbjct:  176 LSGSGVAFVCTFSEALAEGAIKMGMPSDLAHRIAAQTLLGTAKMLQQEGKHPAQLRTDVLTPAGTTIHGLHALEQGGFRAAAMSAVEAATCRAKELS 272          

HSP 2 Score: 56.9954 bits (136), Expect = 7.581e-32
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  149 QIRPLLSRKKLLVSVAAGVKLKDLQE-WTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            ++ P+++ + ++VSVAAG+ L  ++E     +R +RV PN P  V E A VM+ G  A  ED +L+  L  + G+     E   D  TGL
Sbjct:   87 EVAPVVTTEHIIVSVAAGISLSSMEELLPPKTRVLRVSPNLPCVVQEGAMVMTRGHHAGNEDAKLLQNLLEACGQCIEVPESYVDIHTGL 176          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR3_MOUSE (Pyrroline-5-carboxylate reductase 3 OS=Mus musculus GN=Pycrl PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 4.815e-31
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 716
            L GSG A++    EALA+G +  G+P  LA  +A+QT+LG A M+ + GKHP QL+ DV +P GTTI G+H LE+ GFR   M+AV AA  R++ELS
Sbjct:  176 LSGSGVAFVCTFSEALAEGAIKMGMPSGLAHRIAAQTLLGTAKMLQQEGKHPAQLRTDVLTPAGTTIHGLHALERGGFRAATMSAVEAATCRAKELS 272          

HSP 2 Score: 55.4546 bits (132), Expect = 4.815e-31
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  149 QIRPLLSRKKLLVSVAAGVKLKDLQE-WTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            ++ P+++ + ++VSVAAG+ L  ++     ++R +RV PN P  V E A VM+ G  A  +D EL+  L  + G+     E   D  TGL
Sbjct:   87 EVAPIVTTEHIIVSVAAGISLSTMEGLLPPNTRVLRVSPNLPCVVQEGAMVMARGHHAGNDDAELLQNLLEACGQCIEVPESYVDIHTGL 176          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR3_DANRE (Pyrroline-5-carboxylate reductase 3 OS=Danio rerio GN=pycrl PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.062e-30
Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 713
            L GSG A++++  EALADG V  G+P  LA  +A+QT+LGA  ++  SGK P +LK +V +PGGTTI GIH LEK GFR   + AV AA++R+REL
Sbjct:  186 LSGSGVAFVYVFAEALADGAVKMGMPSTLARRIAAQTILGAGVLLRDSGKLPAELKAEVCTPGGTTIHGIHALEKGGFRAAAIGAVEAASERAREL 281          

HSP 2 Score: 50.8322 bits (120), Expect = 1.062e-30
Identity = 37/136 (27.21%), Postives = 62/136 (45.59%), Query Frame = 2
Query:   11 ALSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT-GHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            +++NL R   F+  GV V   N+                       +I   ++++ ++VS+AAG+ +  L+E     +  IR+MPN P  + E A ++S G  A E++  L+  L G  G +    E   DA  GL
Sbjct:   54 SMNNLPR---FKEKGVSVTHSNHEVVGGSRLIFLAVKPHIIPQVLKEISQEVTKEHIIVSMAAGITIATLEELLPAGTHVIRIMPNLPCMLLEGALLLSCGSHAGEQEETLLKTLLGPCGLVEFGPESWIDAHVGL 186          
BLAST of CF834868 vs. ExPASy Swiss-Prot
Match: P5CR3_MACFA (Pyrroline-5-carboxylate reductase 3 OS=Macaca fascicularis GN=PYCRL PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.063e-30
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  426 LLGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 716
            L GSG A++    EALA+G +  G+P  LA  +A+QT+LG A M+   G+HP QL+ DV +PGGTTI G+H LE+ G R   M+AV AA  R+RELS
Sbjct:  176 LSGSGVAFVCAFSEALAEGAIKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRARELS 272          

HSP 2 Score: 54.299 bits (129), Expect = 1.063e-30
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  149 QIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGL 415
            ++ P+++ + +LVSVAAGV L  L+E    ++R +RV+PN P  V E A VM+ G      + +L+  L  + G+     E   D  TGL
Sbjct:   87 EVAPVVTAEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGL 176          
The following BLAST results are available for this feature:
BLAST of CF834868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
P5CR2_MACFA3.047e-3760.42Pyrroline-5-carboxylate reductase 2 OS=Macaca fasc... [more]
P5CR1_BOVIN3.970e-3760.42Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR2_HUMAN5.171e-3760.42Pyrroline-5-carboxylate reductase 2 OS=Homo sapien... [more]
P5CR1_MOUSE5.174e-3760.42Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR2_PONAB6.736e-3760.42Pyrroline-5-carboxylate reductase 2 OS=Pongo abeli... [more]
P5CR_SYNY33.565e-3562.77Pyrroline-5-carboxylate reductase OS=Synechocystis... [more]
P5CR3_RAT7.581e-3251.55Pyrroline-5-carboxylate reductase 3 OS=Rattus norv... [more]
P5CR3_MOUSE4.815e-3151.55Pyrroline-5-carboxylate reductase 3 OS=Mus musculu... [more]
P5CR3_DANRE1.062e-3054.17Pyrroline-5-carboxylate reductase 3 OS=Danio rerio... [more]
P5CR3_MACFA1.063e-3051.55Pyrroline-5-carboxylate reductase 3 OS=Macaca fasc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834868 ID=CF834868; Name=CF834868; organism=Citrus sinensis; type=EST; length=779bp
CTGCACCGCCGCCCTCTCTAATCTCAAACGCCGTGATGCTTTTGAGTCCA
TCGGCGTCAAAGTATTATCCGACAATAACGCCGTTGTTGAATACAGCGAT
GTGGTTGTTTTCTCTGTGAAACCGCAAGTAGTTAAAGATGTGGCCATGCA
GATAAGGCCGCTGTTATCACGGAAGAAGCTTTTGGTTTCTGTTGCTGCAG
GAGTGAAATTGAAAGACCTTCAGGAATGGACTGGTCACAGCCGGTTTATT
AGAGTTATGCCTAATACACCTTCTGCTGTAGGTGAGGCTGCAACAGTTAT
GAGCTTGGGAGGAACTGCAACAGAAGAGGATGGGGAACTAATCGGTAAAT
TATTCGGATCAGTTGGCAAGATATGGCGAGCGGATGAGAAATTGTTTGAT
GCAATCACGGGCCTGAGGTATGTGGCTTCTTGGCAGCGGTCCAGCATATA
TATTTTTAGCAATTGAAGCTTTGGCTGATGGAGGTGTGGCTGCAGGGCTA
CCGCGAGAACTTGCACTTGGTCTAGCTTCTCAGACAGTATTAGGAGCAGC
ATCAATGGTCACTAAAAGTGGGAAGCATCCTGGTCAGCTAAAAGATGATG
TTGCATCGCCTGGTGGGACTACTATTGCTGGTATTCATGAGTTGGAGAAA
AGTGGATTTCGTGGGATATTAATGAATGCTGTTGTTGCTGCTGCTAAGCG
AAGCCGAGAACTGTCCTAGAGCTAATTCATTTTGATTCCAGTTTCTCAGC
TCTTACACTTCTAGTATGGCGATTAAACC
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