CF834870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 72/202 (35.64%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTS 630 F H DVT E AVD + LD +VNNAGI +++ E++++F+INV+ VF G + M KG I+++ S+ G +G G AY SK AV K A DL + IRVN V P +AT P ++ DA R + + G +V+ AVLFL DEA ++ G+ L+VDGG+T+ Sbjct: 59 FLHLDVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 72/202 (35.64%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTS 630 F H DVT E AVD + LD +VNNAGI +++ E++++F+INV+ VF G + M KG I+++ S+ G +G G AY SK AV K A DL + IRVN V P +AT P ++ DA R + + G +V+ AVLFL DEA ++ G+ L+VDGG+T+ Sbjct: 59 FLHLDVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 68/208 (32.69%), Postives = 116/208 (55.77%), Query Frame = 1 Query: 1 LGGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANM-QGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 LGG+ CDVT+ +DV + E+FG LD+MVNNAGI+ +R +F++V +++KG ++G + AA IM + +G I+++ SV+G +G +G Y+ +K ++G+ K A +L GIRVN ++P + + + A +P+ R + + A + G ++VA+ +FLA D + Y++GT L V GG Sbjct: 51 LGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRD--ATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEA-MPQ-----------RIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGG 244
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 68/208 (32.69%), Postives = 116/208 (55.77%), Query Frame = 1 Query: 1 LGGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANM-QGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 LGG+ CDVT+ +DV + E+FG LD+MVNNAGI+ +R +F++V +++KG ++G + AA IM + +G I+++ SV+G +G +G Y+ +K ++G+ K A +L GIRVN ++P + + + A +P+ R + + A + G ++VA+ +FLA D + Y++GT L V GG Sbjct: 51 LGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRD--ATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEA-MPQ-----------RIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGG 244
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 68/200 (34.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGF 624 F +T E + E+FGT+DI+VNNAGI + + ++++ + D+N+ F AA+IMIPQ G II+ICS+ +GG AY+ +KHA+ G K +LG+Y I+VN ++P AT + LA E + R AN G D+ A +FLA + Y++G L+VDGG+ Sbjct: 70 FMQVGITAEGAPQKIIAACCERFGTVDILVNNAGI--CKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQ------RVLDHIPANRWG---DTQDLMGAAVFLASPASNYVNGHLLVVDGGY 258
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 1 Query: 1 LGGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633 +GGE F DV K+ + V T E FG LDI+VNNAGI P +I E +F+K +NVKG F K+A M Q G I+++ S AG IG Y+ SK A+LGL +++A D YGIRVN V P + +A + E+ + + + G E ++A A+LF A DEA +++G+ + +DGG T+V Sbjct: 52 MGGE--AAFIFGDVAKDAE--QIVKKTVETFGRLDILVNNAGI--VPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIP--MKRLGKE---EEIAFAILFAACDEAGFMTGSIINIDGGSTAV 251
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 D+F +V ++V + + +FG+LD++VNNAGI+ + E++ V D N+KGVF+ ++ A M+ Q G II++ SV GA+G G Y +K V+GL K+ A +L GI VN V+P + + + A L E+ T+ + F D+AN V FLA D+A+YI+G + V+GG Sbjct: 55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 D+F +V ++V + + +FG+LD++VNNAGI+ + E++ V D N+KGVF+ ++ A M+ Q G II++ SV GA+G G Y +K V+GL K+ A +L GI VN V+P + + + A L E+ T+ + F D+AN V FLA D+A+YI+G + V+GG Sbjct: 55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 D+F +V ++V + + +FG+LD++VNNAGI+ + E++ V D N+KGVF+ ++ A M+ Q G II++ SV GA+G G Y +K V+GL K+ A +L GI VN V+P + + + A L E+ T+ + F D+AN V FLA D+A+YI+G + V+GG Sbjct: 55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621 D+F +V ++V + + +FG+LD++VNNAGI+ + E++ V D N+KGVF+ ++ A M+ Q G II++ SV GA+G G Y +K V+GL K+ A +L GI VN V+P + + + A L E+ T+ + F D+AN V FLA D+A+YI+G + V+GG Sbjct: 55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243 The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bpback to top |