CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16
Identity = 56/200 (28.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            D+T   ++   +D   + FG +DI++NNAGI       IR+  L      ++  V ++N+  +F+  K   R MI   +G II+I SV   IG  G   Y+ +K  ++G +K++A +L   GI VN ++P  + TG+   +L +++ ++         +           T  +++   LFL  ++A YI+G  + V+GG
Sbjct:   60 DITNPNEITKTMDFVYKNFGRVDILINNAGI-------IRDKLLINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMT-NNLSQKQLSKYLSKIPMKRLG----------TIKEISKITLFLISNDANYITGQVIHVNGG 241          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1
Query:   31 HCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTA--------NDVANAVLFLARDEARYISGTNLMVDGGFT 627
            H DV   E + + VD      G LDI+  NAGI+  P       D + + ++ DIN+ GV+H  K A   I+  +  G+I+   S AG  G      Y+ +KH V+GL +++A +L  + +RVN + P  V T +    +  E           N    +  +  T   A         DV+NA+LFL  ++ARYI+G  + VD G T
Sbjct:   73 HADVRDLESLTAEVDRAVSTLGRLDIVSANAGIASVPFLSHDIPD-NTWRQMIDINLTGVWHTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHPTQVNTPM----IQNEGTYRIFSPDLENPTREDFEIASTTTNALPIPWVESVDVSNALLFLVSEDARYITGAAIPVDAGTT 275          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 1
Query:   25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLAL 438
            F   DV   + V  AV    E+ G +DI++NNAGIS        +    E+E +  +N+ GV+H  +     MI +  G II+I S AG  G     AY+ SK AVLGL +++  ++ K+ IRV+ ++P  VA+ +++
Sbjct:   59 FAAADVKDADQVNQAVAQVKEQLGDIDILINNAGIS--KFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSI 194          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLA 435
            DVT +E+V   V+ T EKFG +DI+VN+AG+  +    I E D+  +E + D+N+KG  + +      M+ Q+ G II+I S++G         Y+ SK AV  + + +  +L K G+RV  +SP  V T L+
Sbjct:   64 DVTHKEEVTELVEKTKEKFGQIDILVNSAGLMLSSA--ITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPLS 194          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 1
Query:  100 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +DI+VNNAGI+      +  AD  +++ V ++N+  +F   +   + MI +  G II++ SVAGAIG  G   Y  SK  ++G +K++A ++    I VNCV+P  + + +   L H  +E          +  VA   +  G   T  +VA+AV +LA D A Y++G  + V+GG   +
Sbjct:   81 VDILVNNAGITKDGL-FLHMAD-PDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKE----------KIMVAIPIHRMG---TGTEVASAVAYLASDHAAYVTGQTIHVNGGMAMI 245          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: HDHA_CLOSO (NADP-dependent 7-alpha-hydroxysteroid dehydrogenase OS=Clostridium sordellii PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = 1
Query:   70 VDLTDEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVL-FLARDEARYISGTNLMVDGGF 624
            +D   +  G +DI+VNN G +G P  D+     D   F ++F+ NV  V+   K     MI    G+I++I SV G+I  +    Y  SK  V  + K +A    KYGIR N V P  +AT  A+  +P+E R       F + V  N           D+AN+VL F+  +++ YI+G+ L V GG+
Sbjct:   74 IDTIIKNEGKIDILVNNFG-TGRPEKDLDLVNGDEDTFFELFNYNVGSVYRLSKLIIPHMIENKGGSIVNISSVGGSIPDISRIGYGVSKSGVNNITKQIAIQYAKYGIRCNAVLPGLIATDAAMNSMPDEFRKS-----FLSHVPLNRIG-----NPEDIANSVLFFVPSEDSSYITGSILEVSGGY 250          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.813e-16
Identity = 62/199 (31.16%), Postives = 104/199 (52.26%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTK++ +    D    +   LD++ N AG +      D  E D   ++   ++NV+ ++  +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAAD  + GIR NCV P  V T      +      E+A     +F+ R     G   TA ++A   ++LA DE+ Y++G  +++DGG++
Sbjct:   58 DVTKKKQI----DQFANEVERLDVLFNVAGFVHHGTVLDCEEKD---WDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEAR---NDFLKRQKT--GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15
Identity = 66/209 (31.58%), Postives = 98/209 (46.89%), Query Frame = 1
Query:   16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATG----LALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDE-ARYISGTNLMVDGGFT 627
            D  F   DV  E  V + V  T E +G +D++VNNA +       I E  L E+E+V  +N+ G +   ++ A  MI +  G II+I S            Y+ SK  ++ L  ++A  L +Y IRV  +SP  + T      +L   P+    +             A   G  L   D+A+  +FLA DE A +I+GTN +VDGG T
Sbjct:   54 DVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK--SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIETSEWKKKSLRKKPDLRPIDHEQ--------HPAGRVGNPL---DIAHLCVFLADDEKAGFITGTNFIVDGGMT 249          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15
Identity = 63/206 (30.58%), Postives = 102/206 (49.51%), Query Frame = 1
Query:   34 CDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQ----GTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            C+VT  +DV   V   +  FGT+DI V NAG++    P+I    + ++ KV D+++  V++       I   + KG+ I   S++ +I  +     AY  +K  V  L+K+++ +   +  RVN VSP  +AT     HL E          F +   ++  +Q    G E    ++  A L+LA D A Y +G +L VDGG+T V
Sbjct:   91 CNVTDFQDVEKVVKQIESDFGTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPFA-RVNSVSPGYIAT-----HLSE----------FADPDVKSKWLQLTPLGREAKPRELVGAYLYLASDAASYTTGADLAVDGGYTVV 280          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 69/207 (33.33%), Postives = 99/207 (47.83%), Query Frame = 1
Query:   16 DTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            D      DV   + V   +D   E FG LDI+ +NAGI       +++    EF++VF +N +G F   + A R +  +  G II   S   ++ G+  HA Y+GSK A+    + +A D G   I VN V+P A+ T + L+    ++P  E   D  V          N  G  +   DVA  V FLA D A +ISG  + VDGG
Sbjct:   62 DAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGI--VSFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHL--REGGRIILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPV---DVARVVSFLASDAAEWISGKIIGVDGG 261          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
FABG_BUCBP3.507e-1628.003-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
LIMC_RHOER4.580e-1631.25(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
YOXD_BACSU7.813e-1634.78Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
Y0419_STAS17.813e-1636.09Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
NODG_RHIME7.813e-1632.22Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
HDHA_CLOSO7.813e-1633.51NADP-dependent 7-alpha-hydroxysteroid dehydrogenas... [more]
BDH2_HUMAN7.813e-1631.163-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
Y019_THEMA1.020e-1531.58Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
SOU2_CANAL1.020e-1530.58Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
STCU_EMENI1.333e-1533.33Versicolorin reductase OS=Emericella nidulans GN=s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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