CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20
Identity = 71/208 (34.13%), Postives = 105/208 (50.48%), Query Frame = 1
Query:    1 LGGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVAT-GLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            LGG+   F C CD+T E+++ +  D    K G +DI+VNNAG  G P P   +  +++F + +++NV   FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A DLG+  IRVN ++P A+ T  L     PE E+     +     + R    Q       D+ANA LFL    A ++SG  L V GG
Sbjct:   58 LGGQ--AFACRCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPF--DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ----KMLQHTPIRRLGQPQ-------DIANAALFLCSPAASWVSGQILTVSGG 249          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20
Identity = 65/196 (33.16%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            +VT  + +   V+   +K+G +D++VNNAGI+  A    ++E D   ++ V ++N+KGVF+  +     MI Q  G+I+++ SV G  G  G   Y  SK  V+G+ K  A +L    IRVN V+P  + T +    LPE+ R            A +    G      +VA  +LFLA DE+ Y++G  + +DGG
Sbjct:   62 NVTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVRMKEED---WDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMT-EKLPEKARE----------TALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGG 243          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20
Identity = 76/206 (36.89%), Postives = 106/206 (51.46%), Query Frame = 1
Query:   13 PDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            P T F  CDVT+EEDV + V  T  +FG LD +VNNAG    P  P+  E     F ++ ++N+ G +   K A    + +++G +I+I S+ GAIG      Y  +K AV  + K +A D  +YG+RVNC+SP  + T L   LA       T D     R      A   G      +VA A +FLA  EA + +GT L+V GG
Sbjct:   54 PGTVFLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPE--ETSAQGFRQLLELNLLGTYTLTKLALP-HLRKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPLWEELA-----ASTPDPTATIRE--GTLAQPLGRMGQPAEVAAAAVFLA-SEATFCTGTELLVTGG 248          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  EDV + +  T   F T+DI+VNNAGI+      I      E++ V +IN+KGVF+  K   R M+ Q  G II++ S+ G  G  G   Y  +K  V+GL K+ A +L    I VN ++P  ++T +   LA   ++E  +         +AR           +DV++ V FLA + ARY++G  L +DGG
Sbjct:   62 DVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNL--IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIP------LARFGE-------PSDVSSVVTFLASEGARYMTGQTLHIDGG 243          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20
Identity = 69/198 (34.85%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQ-GTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+K+++    V     +FG LD+MVNNAG+    P  +I E +LS   K+F+INV G   G++ AA   I Q +KG II+ CS+AG         Y+ +KH+V    +  A +L   GI VN   P    T +      E  + +D++     F A ++ ++ G     +DVAN V FLA +++ YI+G +++ DGG
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAVTPILEIGEEELS---KLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20
Identity = 69/198 (34.85%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQ-GTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+K+++    V     +FG LD+MVNNAG+    P  +I E +LS   K+F+INV G   G++ AA   I Q +KG II+ CS+AG         Y+ +KH+V    +  A +L   GI VN   P    T +      E  + +D++     F A ++ ++ G     +DVAN V FLA +++ YI+G +++ DGG
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAVTPILEIGEEELS---KLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.228e-20
Identity = 64/200 (32.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSVN 636
            DV++E+DV +   L +++F  ++++VNNAGI G       +  L +F++   IN+ G +      A++M P     I+++ S+AG +G     AY  SK  ++ + K++A      GIRV  V+P  V T + +A L    + + + +  R  + R A         +++A AV FLA  +A YI+G+ L+VDGG+ SVN
Sbjct:   63 DVSREDDVVALRALLEKRFSRIEVLVNNAGI-GPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPGA--AIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPM-VAELERAGKLDVSAIRRRVPLGRIAR-------PDEIARAVRFLASAQASYITGSTLVVDGGWMSVN 251          

HSP 2 Score: 71.633 bits (174), Expect = 5.240e-12
Identity = 63/209 (30.14%), Postives = 93/209 (44.50%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELT----------ANDVANAVLFLARDEARYISGTNLMVDGGFTS 630
            D T E +V S  +   E+FG LD+ VN  G++    P+  E+     +++ D+N+ G F  ++ AA   I    G++I     + ++  L P HAY      +  L +  AA+LG  GIR   V+P  + T                  C  N +A  A M    L           A +VA A  FLA  +A YI+G+ L VDGG  S
Sbjct:  331 DRTVETEVVSLFEELRERFGHLDVFVN--GMNEILVPNTEESP-EVLKRILDVNLTGAFTCVREAA---ISMRSGSVILNLGASLSLSPLAPSHAYGAYNAGIDMLTRCTAAELGPLGIRTATVAPGYIRT------------------CAANRLAAVAGMDSASLRQRIPLGRVGDAEEVAEAAYFLASFDASYINGSILHVDGGLIS 515          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DV+KEE + + +D   E FGTLD+MVNN+G +G       E  L ++++V D+NV G F G K A   M+    KG +++I SV   I       Y+ SK  +  + + +A +    GIRVN ++P  +AT   +    EE R +           +            +VA A  +L  +EA Y++G  L VDGG T
Sbjct:   65 DVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMP-HEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDTKKEESRQKQLKKIPMKAFGK----------PEEVAAAAAWLVSEEASYVTGATLFVDGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 75/201 (37.31%), Postives = 101/201 (50.25%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV-CFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            D++K ED+    D+  ++ G LDI+  NAGI    P  +I E    + ++ FDINVKG    ++ A  +  P   G+II   S AG+IG      Y  SK A+  L +N   DL    IRVN VSP  + T         +E   DA+     N  +RN    G   T  +VANAV FLA DE+ Y++G  L VDGG   V
Sbjct:   60 DISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITE---EQVDRTFDINVKGTIFTVQKALSLF-PDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSPGGILTPAY------DELFGDALEEVLEN--SRNTVPAGKVGTPEEVANAVSFLASDESSYLTGVELFVDGGLAQV 248          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 70/209 (33.49%), Postives = 108/209 (51.67%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEA-RYISGTNLMVDGGFT 627
            GG+  TF    DV+KEEDV + +    + +GT+DI+VNNAGI+      +     S++++V D+N+ GVF   + AA+IM+ + KG II+I SV G +G  G   Y+ +K  V+G  K VA +     I VN V+P  +++ +        +  +D      N         G      +VA  V FLA + A  Y++G    +DGG T
Sbjct:  126 GGQALTF--GGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGL--LMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMT------SKLGDDI-----NKKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMT 319          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
HDHA_ECO571.797e-2034.137-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
FABG_THEMA1.797e-2033.163-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
DHB14_BOVIN1.797e-2036.8917-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
FABG_BACSU2.347e-2034.523-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
BUTA_STAES2.347e-2034.85Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ2.347e-2034.85Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
Y4VI_RHISN5.228e-2032.00Uncharacterized short-chain type dehydrogenase/red... [more]
DHG2_BACSU8.918e-2032.83Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
YKVO_BACSU1.165e-1937.31Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
FABG_CUPLA2.595e-1933.493-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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