CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 68/207 (32.85%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARD-EARYISGTNLMVDGG 621
            GGE        +V   ++V   +  T +KF  +D++VNNAGI+      +    L +++ V D+N+ GVF   K  +++M+ Q  G II+I SVAG +G  G   Y+ +K  V+G  K VA +L   G+ VN V+P  +AT +       E    + ++ F   +AR    +       +VA  + FLA D  A YI+G    VDGG
Sbjct:   55 GGE--AIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTL--LLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMT------ENLNAEPILQFIP-LARYGQPE-------EVAGTIRFLATDPAAAYITGQTFNVDGG 243          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 66/196 (33.67%), Postives = 95/196 (48.47%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGF 624
            D+T  + V +AV    +K+G LD+M+NNAGI+             EF+ + DINV GVF+G   A + M    KG II+  SV G  G L    Y  SK +V+GL   +  ++ +  IRV  V+P  V T +   + PE             ++   A      L   ++AN  LFLA D A  I+ T + VDG +
Sbjct:   65 DLTSRDAVMAAVGQVAQKYGRLDVMINNAGITSNNV--FSRVSEEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPE---------IMEGYL--KALPMKRMLEPEEIANVYLFLASDLASGITATTVSVDGAY 247          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19
Identity = 65/212 (30.66%), Postives = 106/212 (50.00%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTEL----TANDVANAVLFLARDEARYISGTNLMVDGG 621
            GG+ ++F  H DV+ E  V +  D   +  GT+DI+ NNAG+       + E  +  F+++  ++++G F   K+   +M+ +  G+II+  S++G    L    Y  +K  +  L K +A D  + GIRVN +SP  + T L   LA   E+E  E           R AN   T L       ++A   LFLA D++ Y++G ++  DGG
Sbjct:   54 GGQAESF--HLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEG-GKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLML-ENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQ---------FREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGG 252          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19
Identity = 70/209 (33.49%), Postives = 108/209 (51.67%), Query Frame = 1
Query:   19 TFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            T+ C CDVT  ++V  A     + F T+DI+V N GI    C      D++  EF    ++N+ GVF+   +A  I   Q  G++++  S++G +  +     AY  SK  V+ L K++A +  K+  RVNCVSP    + +      +E   E      RN +A+            ++A+A L+LA D A Y SGTNL+VDGG+TS+
Sbjct:   72 TYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGI----CTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKFA-RVNCVSPGYTTSDMTGGKFHKE--WEPYTPFERNGLAK------------EIASAYLYLASDAASYASGTNLIVDGGYTSI 261          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 72/208 (34.62%), Postives = 104/208 (50.00%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEA-RYISGTNLMVDGGF 624
            GGE  TF    DV+KE DV S +    +K+GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A +     I VN V P  +A+ +  A L E+   +                 G       VA  V FLA   A  YI+G    + GGF
Sbjct:  123 GGEAITF--GGDVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKK----------ILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGF 315          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTKEEDV + V    ++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      + E+  D           +    G      +VA    FLA  +A Y++G  L  DGG T
Sbjct:   65 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18
Identity = 70/205 (34.15%), Postives = 102/205 (49.76%), Query Frame = 1
Query:   13 PDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            P   F  CDVT+E+DV + V  T  +FG LD +VNNAG    P     E     F ++ ++N+ G +   K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A D   YG+RVNC+SP  + T L   LA L  + R           +A+     G      +V  A +FLA  EA + +G  L+V GG
Sbjct:   54 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRP-EETSAQGFRQLLELNLLGTYTLTKLALPYL-RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRA----TIREGMLAQPLGRMGQPA---EVGAAAVFLA-SEANFCTGIELLVTGG 248          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTKEEDV + V+   ++FG+LD+M+NNAG+   P P   E  L  + +V D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      + E+  D           +    G      ++A+   FLA  +A Y++G  L  DGG T
Sbjct:   65 DVTKEEDVVNLVETAVKEFGSLDVMINNAGVEN-PVPS-HELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEIASVAAFLASSQASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18
Identity = 68/197 (34.52%), Postives = 99/197 (50.25%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGF 624
            D+T  + V +AV    +K+G LD+M+NNAGI+  +    + E D   F+ + DINV GVF+G   A + M    +G II+  SV G  G L    Y  SK  V+GL   +  ++ +  IRV  V+P  V T +     P  E  ED +        +   M+   L   ++AN  LFLA D A  I+ T + VDG +
Sbjct:   65 DLTSRDAVMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVSEED---FKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTKGLPP--EILEDYL--------KTLPMK-RMLKPEEIANVYLFLASDLASGITATTISVDGAY 247          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 67/195 (34.36%), Postives = 102/195 (52.31%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            +VT +E + + ++     FG +DI+VNNAGI+      +R  D   F+ +   N+  V+H  K   R M+ +  G II+I SV G+ G  G   Y  +K  V+G +K++A ++   GI VN V+P  +AT +       E  T++      + V       G    A D+A AV FLA D+A YI+GT L V+GG
Sbjct:   57 NVTDKESIETLLEQIKNDFGDIDILVNNAGITRDNLL-MRMKDEEWFD-IMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMT------EVLTDEQKAGILSNVP-----AGRLGEAKDIAKAVAFLASDDAGYITGTTLHVNGG 238          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
FABG1_SYNY32.595e-1932.853-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
BAIA2_EUBSP3.389e-1933.67Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
YXBG_BACSU9.860e-1930.66Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
YF3H_SCHPO9.860e-1933.49Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
FABG5_BRANA1.288e-1834.623-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
DHGA_BACME1.288e-1832.83Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHB14_HUMAN1.288e-1834.1517-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
DHG2_BACME2.197e-1831.31Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
BAIA1_EUBSP2.197e-1834.52Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
FABG_HAEIN2.869e-1834.363-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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