CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLA-RDEARYISGTNLMVDGG 621
            GG+  TF    DV+KE DV + +    +K+GT+D++VNNAG +      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A +     I VN V P  +A+ +  A L E+   +                 G      DVA  V FLA    A YI+G    +DGG
Sbjct:   63 GGQAITF--GGDVSKEADVDAMMKTAVDKWGTIDVVVNNAGDTL-----LIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKK----------ILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGG 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.869e-18
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLA-RDEARYISGTNLMVDGG 621
            GG+  TF    DV+KE DV + +    + +GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A +     I VN V P  +A+ +  A L E+   +                 G      DVA  V FLA    A YI+G    +DGG
Sbjct:  134 GGQAITF--GGDVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKK----------ILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 325          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 62/196 (31.63%), Postives = 101/196 (51.53%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTEL-TANDVANAVLFLARDEARYISGTNLMVDGG 621
            +VT  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A ++   G+ VN V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLA  EA YI+G  L V+GG
Sbjct:   59 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 240          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLA-RDEARYISGTNLMVDGG 621
            GG+  TF    DV+KE DV + +    + +GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A +     I VN V P  +A+ +  A L E+   +                 G      DVA  V FLA    A YI+G    +DGG
Sbjct:  121 GGQAITF--GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKK----------ILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 312          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLA-RDEARYISGTNLMVDGG 621
            GG+  TF    DV+KE DV + +    + +GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A +     I VN V P  +A+ +  A L E+   +                 G      DVA  V FLA    A YI+G    +DGG
Sbjct:  126 GGQAITF--GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKK----------ILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 317          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
FABG4_BRANA2.869e-1833.823-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG2_BRANA2.869e-1833.823-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG_VIBCH3.747e-1831.633-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG3_BRANA3.747e-1833.823-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA3.747e-1833.823-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
BUTA_STAAW3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAR3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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