CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.747e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A DL   GI VN  +P  V T +  ++A    EE  +     +  F ++ A   G      DV+N V FLA  ++ YI+G  ++VDGG
Sbjct:   61 DVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAV---------------LFLARDEARYISGTNLMVDGGFT 627
            DV     V +A+    EK G +DI+VNNAG+    C      D+S+ ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  +K A++GL K++A +  + GIRVN + P  V T +A +                  +AR +N +  E    ++A A+                FLA DE+ Y++GT  ++DGG T
Sbjct:   62 DVRDPASVAAAIKRAKEKEGRIDILVNNAGV----CRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES------------------IARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAV---------------LFLARDEARYISGTNLMVDGGFT 627
            DV     V +A+    EK G +DI+VNNAG+    C      D+S+ ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  +K A++GL K++A +  + GIRVN + P  V T +A +                  +AR +N +  E    ++A A+                FLA DE+ Y++GT  ++DGG T
Sbjct:   62 DVRDPASVAAAIKRAKEKEGRIDILVNNAGV----CRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES------------------IARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +VT    + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A ++   GI VN V+P  + T +  A   ++     A V             G    A ++ANAV FLA DEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV-----------PAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +VT    + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A ++   GI VN V+P  + T +  A   ++     A V             G    A ++ANAV FLA DEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV-----------PAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.894e-18
Identity = 64/198 (32.32%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTKEEDV + V    ++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      +  +  D           +    G      +VA    FLA  +A Y++G  L  DGG T
Sbjct:   65 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRAD---------VESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.391e-18
Identity = 60/203 (29.56%), Postives = 101/203 (49.75%), Query Frame = 1
Query:   25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTEL----TANDVANAVLFLARDEARYISGTNLMVDGG 621
            F   DV+K + V + V     ++GT+D++VNNAGI+      +      E+  V D N+  +++      R MI    G I++I S+ G  G  G   Y  +K  ++G +K ++ ++G   IRVNC++P  + T +        +   D +        +N  ++G  L    T  ++A A LFLA +++ YI+G  L VDGG
Sbjct:   61 FALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAGITRDSL--LMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMT-------KGLSDNL--------KNEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGG 246          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.347e-18
Identity = 64/198 (32.32%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTKEEDV + V    ++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      +  +  D           +    G      +VA    FLA  +A Y++G  L  DGG T
Sbjct:   65 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRAD---------VESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.424e-17
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTKEEDV + V    ++FGTLDIM+NNAG+   P P   E  L +++KV   N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      + ++  D           +    G      ++A    +LA  EA Y++G  L  DGG T
Sbjct:   65 DVTKEEDVKNIVQTAIKEFGTLDIMINNAGLEN-PVPS-HEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKAD---------VESMIPMGYIGEPEEIAAVAAWLASKEASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.860e-17
Identity = 66/202 (32.67%), Postives = 99/202 (49.01%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVCFRNFVARNANM--QGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            DVT E  + +A+       G L  +VNNAGI+G     +   ++  + ++  +NV G F   K A   M+ + +G I++  SVAG +G     AY  +K AV+ L + +AAD    GIRVN V P  VA T +    L  +        C     AR       G   T  D+A A +FL   +A +++G+ L VDGG T++
Sbjct:   58 DVTDEAAITAAMAGAQRALGPLTGLVNNAGIAGFG--SVHATEVETWSRIMAVNVTGTFLASKAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCPGTVAGTDMGRQLLGTD--------CDPELEARRLAKYPMGRFGTPEDIAEAAVFLLSTKAAFVTGSVLAVDGGMTAI 249          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
BUTA_STAAC3.747e-1834.85Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
UCPA_ECOLI4.894e-1831.63Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO574.894e-1831.63Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
FABG_SHIFL4.894e-1833.173-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI4.894e-1833.173-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
DHG3_BACME4.894e-1832.32Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
FABG_CHLMU6.391e-1829.563-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHG4_BACME8.347e-1832.32Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]
DHG_BACSU1.424e-1731.82Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
HCDS_XANP21.860e-1732.672-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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