CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.860e-17
Identity = 64/199 (32.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A ++   GI VN V+P  + T +  A   ++     A V             G    A ++A+AV FLA DEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV-----------PAGRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.860e-17
Identity = 64/199 (32.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A ++   GI VN V+P  + T +  A   ++     A V             G    A ++A+AV FLA DEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV-----------PAGRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17
Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DV     V +AV    E  G +DI+VNNAG+    C      D+SE ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  SK A++GL K++A +  + GIRVN + P  V T +A +   +    +   V      A         L   ++A    FLA DE+ Y++GT  ++DGG T
Sbjct:   62 DVRDFASVQAAVARAKETEGRIDILVNNAGV----CRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELA---AFLASDESSYLTGTQNVIDGGST 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17
Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DV     V +AV    E  G +DI+VNNAG+    C      D+SE ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  SK A++GL K++A +  + GIRVN + P  V T +A +   +    +   V      A         L   ++A    FLA DE+ Y++GT  ++DGG T
Sbjct:   62 DVRDFASVQAAVARAKETEGRIDILVNNAGV----CRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELA---AFLASDESSYLTGTQNVIDGGST 254          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.172e-17
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   28 CHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            C  DV +   V    D  +  FG L I+VNNAG++ +  P + +    E++++F +N KG F   + AA+ ++    G II+I S   A+      AYT SK AV  + + +A +L    I  NCV+P  VAT +  A   + E   +A V    F               DVA  V FLA DE  +++   + V+GG
Sbjct:   82 CKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFA--GKSEAAVEAGVKSNPFERLG--------KVEDVAPLVAFLASDEGEWVNAQVVRVNGG 269          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.172e-17
Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query:   34 CDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            C++  +E+  + +     K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + M+    G II+I S+ G  G  G   Y  SK  ++G+ K+++ ++   GI VN V+P  + + +    L E++R  +A+V             GT     DVANAV FLA D+A YI+G  + V+GG   V
Sbjct:   59 CNLANKEECSNLIS----KAPKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVANAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.172e-17
Identity = 68/207 (32.85%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            G   D F   CDVT    V  A    +E  G ++++V NAGIS      +       FE+V + N+ G F   + A+R M  +  G II I SV+G + G+G  A Y  +K  ++G+ ++++ +L K G+  N V+P  + T +  A    +ER +   + F    A+         TA +VA AV FLA ++A YI+G  + VDGG
Sbjct:   58 GAPDDLFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAGISKDAF--LMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSG-MWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRA---LDERIQAGALDF--IPAKRVG------TAEEVAGAVSFLASEDASYIAGAVIPVDGG 250          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: SOU1_CANAL (Sorbose reductase SOU1 OS=Candida albicans GN=SOU1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17
Identity = 55/200 (27.50%), Postives = 99/200 (49.50%), Query Frame = 1
Query:   34 CDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            C+VT   DV   ++  ++ FGT+DI V NAG++    P+I      +++K+ D ++ GV++      +I      G++I   S++G I  +      Y  +K A   L K+++ +   +G RVN +SP  + T +A    PE ++    +              G E    ++  A L+LA + + Y +G+N+ VDGG+T
Sbjct:   91 CNVTDPNDVSKVINEIEKDFGTIDIFVANAGVAWTDGPEIDVQGYDQWKKIVDCDLNGVYYCAHTVGQIFKKNKSGSLIITSSMSGTIVNIPQLQAPYNAAKAACTHLAKSLSVEWASFGARVNSISPGYILTDIADFADPEMKKKWWQLTPL-----------GREGLPQELVGAYLYLASNASTYTTGSNIAVDGGYT 279          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17
Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            G     F   CDVT  + V  A    +E  G ++++V+NAG+S      +      +FEKV + N+ G F   + A+R M     G +I I SV+G+ G      Y  SK  V+G+ +++A +L K  +  N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLA ++A YISG  + VDGG
Sbjct:   50 GAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASEDASYISGAVIPVDGG 242          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17
Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 1
Query:    4 GGEPDTFFCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            G     F   CDVT  + V  A    +E  G ++++V+NAG+S      +      +FEKV + N+ G F   + A+R M     G +I I SV+G+ G      Y  SK  V+G+ +++A +L K  +  N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLA ++A YISG  + VDGG
Sbjct:   50 GAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASEDASYISGAVIPVDGG 242          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
FABG_SALTY1.860e-1732.163-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI1.860e-1732.163-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
UCPA_SALTY2.429e-1734.00Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI2.429e-1734.00Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
SDR1_PICAB3.172e-1731.82Short-chain type dehydrogenase/reductase OS=Picea ... [more]
FABG_RICFE3.172e-1734.003-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_MYCS23.172e-1732.853-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
SOU1_CANAL4.143e-1727.50Sorbose reductase SOU1 OS=Candida albicans GN=SOU1... [more]
FABG_MYCTU4.143e-1731.553-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO4.143e-1731.553-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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