CF834870

Overview
NameCF834870
Unique NameCF834870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:217..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17
Identity = 63/196 (32.14%), Postives = 93/196 (47.45%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            DV+  + V +AV+   +  G  D++VNNAG+  AP   I        +KV++INVKGV  G++ A      +  G  II+ CS AG +G      Y+ SK AV GL +  A DL   GI VN   P  V T +      +        + +           G      DVA  V +LA  ++ Y++G +L++DGG
Sbjct:   59 DVSDRDQVFAAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17
Identity = 69/198 (34.85%), Postives = 102/198 (51.52%), Query Frame = 1
Query:   55 DVCSAVDLTD-----EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            +VC+  D  +      K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + MI    G II+I S+ G  G  G   Y  SK  ++G+ K+++ ++   GI VN V+P  + + +    L E++R  +A+V             GT     DVA+AV FLA D+A YI+G  + V+GG   V
Sbjct:   57 EVCNLADKEECRNLISKASKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVAHAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17
Identity = 57/179 (31.84%), Postives = 95/179 (53.07%), Query Frame = 1
Query:   85 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGG 621
            +K  ++DI++NNAGI+      +      E+E V  IN+  VF+  K   R MI +  G I++I SV G +G  G   Y+ SK  ++G +K++A ++ + GI VN VSP  + T L       + +   + +  +              TA ++ANAV+FL+ ++A YI+G  + V+GG
Sbjct:   75 QKKYSIDILINNAGITSDNL--LVYMSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNLNVFQYKKHLSKIPMKRIG-----------TAEEIANAVIFLSSEKASYITGQTIHVNGG 240          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17
Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 1
Query:   67 AVDLTDEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSVN 636
            A++   ++ G +D++VNNAG ++ AP  D+      E+ K+F ++V G F   + AAR M+ Q +G  II+I SV          AYT +KHA+ GL K +A +L ++ I VN V+P A+AT +      + +   +  +  R F A            +++A+ V++L  + A Y +G +L+VDGGF   N
Sbjct:   70 ALEKLIQRLGRIDVLVNNAGAMTKAPFLDMA---FDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGA-----------THEIASLVVWLCSEGANYTTGQSLIVDGGFMLAN 247          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17
Identity = 60/198 (30.30%), Postives = 103/198 (52.02%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVTK+  +    D    +   +D++ N AG        I + +  +++   ++NV+ +F  +K     M+ Q  G II++ SVA +I G+     Y+ +K AV+GL K+VAAD  + GIR NCV P  V T      +   +  ++A+  F      N    G   +A +VA   ++LA DE+ Y++G  +++DGG++
Sbjct:   58 DVTKKRQI----DQFASEIERIDVLFNVAGF--VHHGTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARDNPKEALKTF-----LNRQKTGRFASAEEVALLCVYLASDESAYVTGNPVIIDGGWS 244          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 68/200 (34.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   34 CDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            C++  +E+  + +     K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ ++   GI VN V+P  + + +    L E++R  +A+V             GT     DVA AV FLA + A YI+G  L V+GG   V
Sbjct:   59 CNLANKEECNNLIS----KISNLDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGIPEDVAYAVAFLASNHASYITGQTLHVNGGMLMV 241          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 68/200 (34.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   34 CDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFTSV 633
            C++  +E+  + +  T      LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ ++   GI VN V+P  + + +    L E++R  +A+V             GT     DVA AV FLA + A YI+G  L V+GG   V
Sbjct:   59 CNLANKEECSNLISKTSN----LDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGMLMV 241          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 59/203 (29.06%), Postives = 97/203 (47.78%), Query Frame = 1
Query:   25 FCHCDVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTEL----TANDVANAVLFLARDEARYISGTNLMVDGG 621
            F   DV+K + V + V     ++ T+D++VNNAGI+      +      E+  V + N+  +++      R MI    G II+I S+ G  G  G   Y  +K  ++G +K ++ ++G   IRVNC++P  + T +  +                N   +N  ++G  L       ++A A LFLA D + YI+G  L VDGG
Sbjct:   61 FALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDAL--LMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKS---------------LNDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITGQVLSVDGG 246          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 61/198 (30.81%), Postives = 92/198 (46.46%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVT E DV + V    ++FG LD+M+NNAG+         E  LS++ KV D N+ G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      + E+  D           +    G      ++A    +LA  EA Y++G  L  DGG T
Sbjct:   65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------VESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
BLAST of CF834870 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 61/198 (30.81%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   37 DVTKEEDVCSAVDLTDEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAADLGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVCFRNFVARNANMQGTELTANDVANAVLFLARDEARYISGTNLMVDGGFT 627
            DVT E DV + V  + ++FG LD+M+NNAG+         E  LS++ KV D N+ G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A +    GIRVN + P A+ T +      + E+  D           +    G      ++A    +LA  EA Y++G  L  DGG T
Sbjct:   65 DVTVESDVINLVQSSIKEFGKLDVMINNAGMENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------VESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
The following BLAST results are available for this feature:
BLAST of CF834870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
BUDC_KLEPN4.143e-1732.14Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
FABG_RICCN5.410e-1734.853-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_BUCAP7.066e-1731.843-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
YOHF_ECOLI9.229e-1732.81Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
BDH2_MOUSE9.229e-1730.303-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]
FABG_RICTY1.205e-1634.003-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICPR1.205e-1634.003-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_CHLTR1.205e-1629.063-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHG_BACME1.205e-1630.81Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
DHG1_BACME1.205e-1630.81Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834870 ID=CF834870; Name=CF834870; organism=Citrus sinensis; type=EST; length=765bp
CTTGGTGGTGAGCCAGACACTTTTTTTTGCCATTGTGATGTCACAAAGGA
GGAAGATGTTTGCTCTGCTGTTGACCTCACAGACGAAAAATTTGGCACAC
TTGATATCATGGTCAATAATGCTGGCATTTCAGGGGCTCCTTGTCCTGAC
ATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGGTATTTGACATAAATGT
GAAGGGAGTTTTCCATGGAATGAAGCATGCAGCTCGGATCATGATCCCAC
AAACTAAAGGCACTATCATATCAATCTGCAGTGTTGCAGGTGCCATTGGT
GGTCTTGGCCCACATGCCTATACGGGGTCCAAGCATGCCGTTTTGGGACT
CAACAAGAATGTTGCCGCTGATCTTGGAAAATATGGCATCCGCGTGAACT
GTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGCTTTGGCTCACTTGCCT
GAAGAGGAGAGGACAGAGGATGCCATGGTATGTTTCCGTAATTTTGTTGC
AAGAAATGCTAACATGCAGGGCACGGAGTTGACAGCTAATGATGTGGCTA
ACGCTGTTCTCTTCCTAGCAAGAGATGAAGCTAGGTACATAAGTGGAACG
AATCTGATGGTTGATGGGGGCTTCACATCTGTGAATCATTCACTTCGAGT
CTTTATATAAAATATTGGTTCCACGCCAATCAACAATTAGATGCATAAAA
GGTGATTGGAGCATTTGAGTTTCTTCGTTATTTCAGTTAGATACCTGCAA
TTGATTCCATATTTC
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