CF834875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: OGDHL_PONAB (2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii GN=OGDHL PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.295e-35 Identity = 58/140 (41.43%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 151 TRIQKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASD-IAICMVEQLCPFPYDLVQRELKRYP 567 +++ CNW +VN +TPA+YFHVLRRQI FRKPL + +PK+LLR E K + + GT+F+R+I + + E + RLI C+GKVYY+L + R + +AI +EQ+ PFP+DL+++E ++YP Sbjct: 806 SQLYDCNWIVVNCSTPANYFHVLRRQILLPFRKPLIIFTPKSLLRHPEAKFSFDQM----------VSGTSFQRVIPEDGAAARAPEQVRRLIFCTGKVYYDLVKERSSQGLEEKVAITRLEQISPFPFDLIKQEAEKYP 935 HSP 2 Score: 55.8398 bits (133), Expect = 1.295e-35 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIP 128 +R +G+V++LPHG +G GPEHSSAR ERFL MS+D+ P Sbjct: 757 VRHNGIVLLLPHGMEGMGPEHSSARPERFLQMSNDDSDAYP 797
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_DICDI (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Dictyostelium discoideum GN=odhA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.734e-35 Identity = 58/137 (42.34%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 160 QKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 Q+ N++ +N +TPA+YFH LRRQ+ +RKPL V PK LLR C S L+E GT F+ ++ D + ++ I R+I CSGKV+Y+L E RK + +D+AI +EQ+ PFPY +Q E+ RY N Sbjct: 708 QETNFYFINPSTPANYFHALRRQMIRNYRKPLIVAGPKVLLRHPNCFSTLNEM----------APGTHFQTVLSDPDTINNAST-IKRVIFCSGKVFYDLQEERKAKNFNDVAIIRLEQIAPFPYQRIQEEINRYSN 833 HSP 2 Score: 61.2326 bits (147), Expect = 3.734e-35 Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 LRQSG+V++LPHG+DG GPEHSS R+ERFL +SD Sbjct: 661 LRQSGIVILLPHGFDGAGPEHSSCRIERFLQLSD 694
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_CAEBR (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis briggsae GN=CBG01737 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.371e-34 Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 154 RIQKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKK-HSASDIAICMVEQLCPFPYDLVQRELKRY 564 ++ NW + N TTPA+ +H+LRRQ+ FRKP V SPK+LLR +S + +F + G+ F+R+I + S + RL+ C+GKVYY++ RK +D+A+ VEQL PFPYDLVQ+E ++Y Sbjct: 821 QLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVVFSPKSLLRHPMARSPVEDF----------QSGSNFQRIIPETGAPSQNPPNVQRLVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKY 948 HSP 2 Score: 58.9214 bits (141), Expect = 2.371e-34 Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDN 113 +RQSGLV++LPHGY+G GPEHSSAR ERFL M +++ Sbjct: 768 IRQSGLVMLLPHGYEGMGPEHSSARPERFLQMCNED 803
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_CAEEL (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T22B11.5 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 8.884e-34 Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 154 RIQKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKK-HSASDIAICMVEQLCPFPYDLVQRELKRY 564 ++ NW + N TTPA+ +H+LRRQ+ FRKP V SPK+LLR +S + +F + G+ F+R+I + S + R++ C+GKVYY++ RK +D+A+ VEQL PFPYDLVQ+E ++Y Sbjct: 823 QLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVVFSPKSLLRHPMARSPVEDF----------QSGSNFQRVIPETGAPSQNPPDVKRVVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKY 950 HSP 2 Score: 58.9214 bits (141), Expect = 8.884e-34 Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDN 113 +RQSGLV++LPHGY+G GPEHSSAR ERFL M +++ Sbjct: 770 IRQSGLVMLLPHGYEGMGPEHSSARPERFLQMCNED 805
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RICBR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii (strain RML369-C) GN=sucA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.535e-31 Identity = 59/132 (44.70%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N ++ TTPAS FH+LRRQI RKPL VMSPK+LLR K S L E TTF ++ + N I ++ILCSGKVYY+L+E + S S IAI +EQL PF +V LK+Y Sbjct: 737 NMYVTYPTTPASIFHLLRRQIIDNVRKPLIVMSPKSLLRHKNVVSKLDELG----------SNTTFLPVLDEVNKLE--ASNITKVILCSGKVYYDLFE--MRGSNSSIAIIRLEQLYPFEKKVVVELLKKY 854 HSP 2 Score: 64.3142 bits (155), Expect = 8.535e-31 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHM-SDDNPYV 122 LR SGLVV+LPHG++GQGPEHSSARLERFL + ++DN YV Sbjct: 701 LRMSGLVVLLPHGFEGQGPEHSSARLERFLQLAAEDNMYV 740
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RICFE (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis GN=sucA PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 2.452e-30 Identity = 59/132 (44.70%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N ++ TTPAS FH+LRRQI RKPL +MSPK+LLR K S L E + TTF ++ + N I ++ILCSGKVYY+L+E R + S+IAI +EQL PF LV LK+Y Sbjct: 788 NMYVTYPTTPASIFHLLRRQILDDTRKPLIIMSPKSLLRHKYAVSKLDELG----------ENTTFLPVLDEVNKVD--TNNITKVILCSGKVYYDLFEMRGNN--SNIAIIRLEQLYPFEKKLVASLLKKY 905 HSP 2 Score: 62.003 bits (149), Expect = 2.452e-30 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHM-SDDNPYV 122 LR SGLVV+LPH ++GQGPEHSSARLERFL + ++DN YV Sbjct: 752 LRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEDNMYV 791
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_XENLA (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Xenopus laevis GN=dhtkd1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.453e-30 Identity = 57/135 (42.22%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKK--HSASDIAICMVEQLCPFPYDLVQRELKRYP 567 N +V+ TTPA YFH+LRRQ+ FRKPL V SPK LLR S+L + G TF+ +I D S + + ++ILCSGK YY L++ R+ AI VE+LCPFP + +Q+E+ RYP Sbjct: 741 NMFVVHPTTPAQYFHLLRRQMVRSFRKPLIVASPKMLLRYPAAVSSLEDI----------APGKTFRSVI---GDSSADPKSVSKVILCSGKHYYALHKQREALGEQGRSSAIIRVEELCPFPLEALQQEIHRYP 862 HSP 2 Score: 59.3066 bits (142), Expect = 2.453e-30 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 L QSG+V++LPHGYDG GPEHSS R+ERFL M D Sbjct: 696 LLQSGIVILLPHGYDGAGPEHSSCRIERFLQMCD 729
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_MOUSE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Mus musculus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.051e-30 Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*R-----KKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N +V+ TTPA YFH+LRRQ+ FRKPL V SPK LLR S L E GT FK +I D S + + LI CSGK +Y L + R KKH D AI +E+LCPFP D +Q+E+ +Y Sbjct: 734 NMFVVHPTTPAQYFHLLRRQMIRNFRKPLIVASPKMLLRYPAAVSTLEEM----------APGTAFKPVI---GDSSVDPKNVKTLIFCSGKHFYALLKQRESLGTKKH---DFAIIRLEELCPFPLDALQQEMSKY 854 HSP 2 Score: 60.077 bits (144), Expect = 7.051e-30 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 L QSGLV++LPHGYDG GPEHSS R+ERFL M D Sbjct: 689 LLQSGLVILLPHGYDGAGPEHSSCRIERFLQMCD 722
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_HUMAN (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-29 Identity = 58/134 (43.28%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSAS--DIAICMVEQLCPFPYDLVQRELKRY 564 N +V+ TTPA YFH+LRRQ+ FRKPL V SPK LLR S L E GTTF +I D S + + L+ CSGK +Y L + R+ A D AI VE+LCPFP D +Q+E+ +Y Sbjct: 733 NMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASPKMLLRLPAAVSTLQEM----------APGTTFNPVI---GDSSVDPKKVKTLVFCSGKHFYSLVKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKY 853 HSP 2 Score: 58.151 bits (139), Expect = 2.026e-29 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 L QSG+V++LPHGYDG GP+HSS R+ERFL M D Sbjct: 688 LLQSGIVILLPHGYDGAGPDHSSCRIERFLQMCD 721
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_RAT (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.638e-29 Identity = 58/134 (43.28%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSAS--DIAICMVEQLCPFPYDLVQRELKRY 564 N +V+ TTPA YFH+LRRQ+ FRKPL V SPK LLR S L E GT FK +I D S + + LI CSGK +Y L + R+ A D AI +E+LCPFP D +Q+E+ +Y Sbjct: 733 NMFVVHPTTPAQYFHLLRRQMMRNFRKPLIVASPKMLLRYPVAVSTLEEM----------APGTAFKPVI---GDSSVDPKNVKTLIFCSGKHFYALLKQRESLGAKKRDFAIIRLEELCPFPLDSLQQEMGKY 853 HSP 2 Score: 58.9214 bits (141), Expect = 2.638e-29 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 L QSGLV++LPHGYDG GP+HSS R+ERFL M D Sbjct: 688 LLQSGLVILLPHGYDGAGPDHSSCRIERFLQMCD 721 The following BLAST results are available for this feature:
BLAST of CF834875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834875 ID=CF834875; Name=CF834875; organism=Citrus sinensis; type=EST; length=571bpback to top |