CF834875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RICCN (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii GN=sucA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.434e-29 Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N ++ TTPAS FH+LRRQI RKPL VMSPK+LLR K S L E + TTF ++ + I ++ILCSGKVYY+L+E R + S+IAI +EQL PF LV LK+Y Sbjct: 739 NMYVTYPTTPASIFHLLRRQILDDTRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFLPVLDEVTKVD--TNNITKVILCSGKVYYDLFEMRGNN--SNIAIIRLEQLYPFEKKLVASLLKKY 856 HSP 2 Score: 60.077 bits (144), Expect = 3.434e-29 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDN 113 LR SGLVV+LPH ++GQGPEHSSARLERFL ++ +N Sbjct: 703 LRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEN 738
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_DROME (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG1544 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.822e-29 Identity = 60/134 (44.78%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 N HIVN TTPA Y+HVLRRQ+ FRKPL V++PK LLR S +F + GT F ++ D E + ++ILCSGK YY L E R+K A D AI +E LCPFP +Q +L +Y N Sbjct: 734 NVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDF----------QPGTLFHNVL---GDTIAKPEQVRKVILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGN 854 HSP 2 Score: 47.3654 bits (111), Expect = 5.822e-29 Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 + + LV++LPHGYDG EHSS R+ERFL + D Sbjct: 689 MESNALVMLLPHGYDGAASEHSSCRIERFLQLCD 722
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RICTY (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia typhi GN=sucA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.672e-28 Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N +I TTPAS FH+LRRQI RKPL VMSPK+LLR K S L E + TTF ++ + + I ++ILCSGKVYY+L+ K+ S+I I +EQL PF LV LK+Y Sbjct: 740 NMYITYPTTPASIFHLLRRQILESIRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFIPVLDEVTKID--KNNITKVILCSGKVYYDLF--AKRVHNSNIVIIRLEQLYPFEKTLVASLLKKY 857 HSP 2 Score: 60.077 bits (144), Expect = 1.672e-28 Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHM-SDDNPYV 122 LR SGLVV+LPH ++GQGPEHSSARLERFL + +++N Y+ Sbjct: 704 LRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEENMYI 743
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_PONAB (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Pongo abelii GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.672e-28 Identity = 58/134 (43.28%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSAS--DIAICMVEQLCPFPYDLVQRELKRY 564 N +V+ TTPA YFH+LRRQ+ FRKPL V SPK LLR S L E GTTF +I D S + + L+ CSGK +Y L + R+ A D AI VE+LCPFP D +Q+E+ +Y Sbjct: 733 NMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASPKMLLRLPAAVSTLQEM----------APGTTFNPVI---GDSSVDPKKVKTLVFCSGKHFYSLMKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKY 853 HSP 2 Score: 55.0694 bits (131), Expect = 1.672e-28 Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHMSD 107 L QSG+V +LPHG+DG GP+HSS R+ERFL M D Sbjct: 688 LLQSGIVTLLPHGHDGAGPDHSSCRIERFLQMCD 721
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RICPR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii GN=sucA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.802e-28 Identity = 57/132 (43.18%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N +I TTPAS FH+LRRQI RKPL VMSPK+LLR K S L E + TTF ++ + + ++ILCSGKVYY+L+ R + S+I I +EQL PF LV LK+Y Sbjct: 739 NMYITYPTTPASIFHLLRRQILESTRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFIPILDEVTKID--TNNVTKVILCSGKVYYDLFAMRTNN--SNIVIIRLEQLYPFEKKLVASLLKKY 856 HSP 2 Score: 60.077 bits (144), Expect = 4.802e-28 Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 6 LRQSGLVVMLPHGYDGQGPEHSSARLERFLHM-SDDNPYV 122 LR SGLVV+LPH ++GQGPEHSSARLERFL + +++N Y+ Sbjct: 703 LRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEENMYI 742
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_ECOLI (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli (strain K12) GN=sucA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.795e-27 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + +TPA +H+LRRQ R+PL VMSPK+LLR S+L E + TF I + ++ +G+ R+++CSGKVYY+L E R+K++ D+AI +EQL PFP+ +Q L+++ Sbjct: 732 ARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAN-----------GTFLPAIGEIDELDP--KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQF 863 HSP 2 Score: 55.4546 bits (132), Expect = 1.795e-27 Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHM 101 R GLV++LPHGY+GQGPEHSSARLER+L + Sbjct: 710 RMCGLVMLLPHGYEGQGPEHSSARLERYLQL 740
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_ECOL6 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O6 GN=sucA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.795e-27 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + +TPA +H+LRRQ R+PL VMSPK+LLR S+L E + TF I + ++ +G+ R+++CSGKVYY+L E R+K++ D+AI +EQL PFP+ +Q L+++ Sbjct: 732 ARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAN-----------GTFLPAIGEIDELDP--KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQF 863 HSP 2 Score: 55.4546 bits (132), Expect = 1.795e-27 Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHM 101 R GLV++LPHGY+GQGPEHSSARLER+L + Sbjct: 710 RMCGLVMLLPHGYEGQGPEHSSARLERYLQL 740
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_ECO57 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O157:H7 GN=sucA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.795e-27 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + +TPA +H+LRRQ R+PL VMSPK+LLR S+L E + TF I + ++ +G+ R+++CSGKVYY+L E R+K++ D+AI +EQL PFP+ +Q L+++ Sbjct: 732 ARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAN-----------GTFLPAIGEIDELDP--KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQF 863 HSP 2 Score: 55.4546 bits (132), Expect = 1.795e-27 Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHM 101 R GLV++LPHGY+GQGPEHSSARLER+L + Sbjct: 710 RMCGLVMLLPHGYEGQGPEHSSARLERYLQL 740
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_GEOSW (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp. (strain WCH70) GN=odhA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.479e-26 Identity = 52/138 (37.68%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FR---KPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASD-IAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N++T A YFH+LRRQ R +PL +M+PK+LLR S++ EF + Q HP +++G R E + R+ILC+GK +L E K D + I VE+L PFP + +Q RYPN Sbjct: 757 NWTVANLSTAAQYFHILRRQAGILQREEVRPLVLMTPKSLLRHPLAASDVEEFTNGQFHPVIEQKGLGENR------------EKVERIILCTGKFAIDLAEQINKMEGLDWLHIVRVEELYPFPKEELQAIFARYPN 882 HSP 2 Score: 60.077 bits (144), Expect = 1.479e-26 Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSS RLERFL ++ +N + + + Sbjct: 722 QKSGLVMLLPHGYEGQGPEHSSGRLERFLQLAAENNWTVANL 763
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIN (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans GN=sucA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.480e-26 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 A L+ +Q C N + N+TT A YFH+LRRQ+ +RKPL +++PK+LLR ++LS +D+ QG + LI D D E +++ +GKVYY+L + + ++ ++A+ VEQ+ PFP +Q LK + N Sbjct: 720 ARLERFLQLCALDNMQVCNLTTAAQYFHLLRRQMLRNYRKPLVIVTPKSLLR---FPASLSPVEDI-------LQGAFREILIDDSGSKPDKIE---KVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKN 853 HSP 2 Score: 57.3806 bits (137), Expect = 1.480e-26 Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHM 101 R SGL+++LPHGY+GQGPEHSSARLERFL + Sbjct: 698 RLSGLIMLLPHGYEGQGPEHSSARLERFLQL 728 The following BLAST results are available for this feature:
BLAST of CF834875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834875 ID=CF834875; Name=CF834875; organism=Citrus sinensis; type=EST; length=571bpback to top |