CF834875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BRUME (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis GN=sucA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.497e-24 Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + NVTTPA+YFH+LRRQ+ FRKPL +M+PK+LLR K S L+E + G F + + KD + I R++LCSGKVYY+LYE R+K D+ + VEQL PFP + EL R+ Sbjct: 792 ARLERYLQLCAEDNMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRF 933
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BRUMB (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.497e-24 Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + NVTTPA+YFH+LRRQ+ FRKPL +M+PK+LLR K S L+E + G F + + KD + I R++LCSGKVYY+LYE R+K D+ + VEQL PFP + EL R+ Sbjct: 792 ARLERYLQLCAEDNMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRF 933
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BRUC2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.497e-24 Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C N + NVTTPA+YFH+LRRQ+ FRKPL +M+PK+LLR K S L+E + G F + + KD + I R++LCSGKVYY+LYE R+K D+ + VEQL PFP + EL R+ Sbjct: 792 ARLERYLQLCAEDNMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRF 933
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_RALEH (2-oxoglutarate dehydrogenase E1 component OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhA PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 A ++ +Q C N + TTPA FH+LRRQ+ FRKPL +M+PK+LLR K+ S LS+ +GH F+ +I DH + + + + R+I+CSGKVYY+L RK+ A+D A+ +EQL PFP+ V ELK+YPN Sbjct: 742 ARIERFLQLCADHNMQVCQPTTPAQIFHLLRRQMIRLFRKPLVIMTPKSLLRNKDAVSPLSDL--AKGH---------FETVIPDHEELNASK--VKRVIMCSGKVYYDLVNTRKEREANDTAVIRLEQLYPFPHKAVAAELKKYPN 875
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCPA (2-oxoglutarate decarboxylase OS=Mycobacterium paratuberculosis GN=kgd PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.181e-23 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S++ +F +++ ++ T++ I D S R++L SGK+YYEL + K + D+AI +EQL P P + L RYPN Sbjct: 1063 STPSNYFHLLRRHALDGIKRPLIVFTPKSMLRNKAAVSDIKDFTEIKFRSVLEEP--TYEDGIGDRGKVS-------RVLLTSGKLYYELVARKNKDNRDDVAIVRIEQLAPLPKRRLGETLDRYPN 1180 HSP 2 Score: 48.1358 bits (113), Expect = 5.181e-23 Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+SAR+ERFL + Sbjct: 1023 SNVVLLLPHGHEGQGPDHTSARIERFLQL 1051
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCS2 (2-oxoglutarate decarboxylase OS=Mycobacterium smegmatis GN=kgd PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.182e-23 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKD--HNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TPA+YFH+LRR ++PL V +PK++LR K S++ +F + + F+ ++++ + D + RL+L SGK+YYEL + K + D+AI +EQL P P + L RYPN Sbjct: 1043 STPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTE-----------SKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKIYYELAARKAKENREDVAIVRIEQLAPLPRRRLAETLDRYPN 1160 HSP 2 Score: 46.2098 bits (108), Expect = 5.182e-23 Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+S R+ERFL + Sbjct: 1003 SDVVLLLPHGHEGQGPDHTSGRIERFLQL 1031
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAI (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sucA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.207e-23 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 N I TT + FH+ R+QI KPL + +PK+LLR S+ FDD+ + F K I D D+ + +E IRLI CSGK+YY+L R++ + I + +EQL PFP + + LK Y Sbjct: 722 NMQICIPTTSSQIFHIFRKQIFDKILKPLIIFTPKSLLRNPMASSS---FDDLV-YGKFQK--------ILDEVDNVNKKE--IRLIFCSGKIYYDLLRNRREKKINSIILIRIEQLYPFPEGEILKILKNY 839 HSP 2 Score: 54.6842 bits (130), Expect = 5.207e-23 Identity = 22/31 (70.97%), Postives = 29/31 (93.55%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHM 101 ++S LVV+LPHGY+GQGPEHSS+R+ERFL + Sbjct: 687 KKSNLVVLLPHGYEGQGPEHSSSRIERFLQL 717
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCSS (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain MCS) GN=kgd PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.739e-23 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKD--HNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TPA+YFH+LRR ++PL V +PK++LR K S++ +F + + F+ ++++ + D + R++L SGK+YYEL + K S D+AI +EQL P P + L +YPN Sbjct: 1084 STPANYFHLLRRHSLDGIQRPLIVFTPKSMLRNKAAVSDIRDFTEQK-----------FRSVLEEPTYTDGDGDRNKVTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPN 1201 HSP 2 Score: 46.2098 bits (108), Expect = 6.739e-23 Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+S R+ERFL + Sbjct: 1044 SDVVLLLPHGHEGQGPDHTSGRIERFLQL 1072
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCSK (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain KMS) GN=kgd PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.739e-23 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKD--HNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TPA+YFH+LRR ++PL V +PK++LR K S++ +F + + F+ ++++ + D + R++L SGK+YYEL + K S D+AI +EQL P P + L +YPN Sbjct: 1084 STPANYFHLLRRHSLDGIQRPLIVFTPKSMLRNKAAVSDIRDFTEQK-----------FRSVLEEPTYTDGDGDRNKVTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPN 1201 HSP 2 Score: 46.2098 bits (108), Expect = 6.739e-23 Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+S R+ERFL + Sbjct: 1044 SDVVLLLPHGHEGQGPDHTSGRIERFLQL 1072
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCSJ (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain JLS) GN=kgd PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.739e-23 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKD--HNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TPA+YFH+LRR ++PL V +PK++LR K S++ +F + + F+ ++++ + D + R++L SGK+YYEL + K S D+AI +EQL P P + L +YPN Sbjct: 1079 STPANYFHLLRRHSLDGIQRPLIVFTPKSMLRNKAAVSDIRDFTEQK-----------FRSVLEEPTYTDGDGDRNKVTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPN 1196 HSP 2 Score: 46.2098 bits (108), Expect = 6.739e-23 Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+S R+ERFL + Sbjct: 1039 SDVVLLLPHGHEGQGPDHTSGRIERFLQL 1067 The following BLAST results are available for this feature:
BLAST of CF834875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834875 ID=CF834875; Name=CF834875; organism=Citrus sinensis; type=EST; length=571bpback to top |