CF834875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCUA (2-oxoglutarate decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kgd PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.741e-23 Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S++ +F +++ ++ T++ + D N + R++L SGK+YYE+ + K D+AI VEQL P P ++ L RYPN Sbjct: 1054 STPSNYFHLLRRHALDGIQRPLIVFTPKSMLRNKAAVSDIKDFTEIKFRSVLEEP--TYEDGVGDRNL-------VNRILLTSGKIYYEMVARKAKDKREDVAIVRVEQLAPLPRRRLRETLDRYPN 1171 HSP 2 Score: 46.595 bits (109), Expect = 6.741e-23 Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+S R+ERFL + Sbjct: 1014 SNVVLLLPHGHEGQGPDHTSGRIERFLQL 1042
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACP2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus pumilus (strain SAFR-032) GN=odhA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.809e-23 Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FR---KPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE--*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N+T+ A YFH+LRRQ R +PL +M+PK+LLR S + E D Q P ++ G L+ DH E + RL+L SGKV ++ + + + + I VEQL PFP ++ L + N Sbjct: 749 NWTVANLTSAAQYFHILRRQAKMLLREEIRPLVIMTPKSLLRNPNSLSEVQELTDGQFQPVLEQPG-----LVHDH-------EKVSRLVLSSGKVSIDISDRFTQMEEPKDWLHIARVEQLYPFPAKDIKAILSKLTN 875 HSP 2 Score: 56.9954 bits (136), Expect = 8.809e-23 Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSS R ERFL + +N + + + Sbjct: 714 QKSGLVMLLPHGYEGQGPEHSSGRTERFLQSAAENNWTVANL 755
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACSU (2-oxoglutarate dehydrogenase E1 component OS=Bacillus subtilis GN=odhA PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 1.146e-22 Identity = 46/139 (33.09%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FR---KPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKK--HSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N+T+ A YFH+LRRQ R +PL +M+PK+LLR S + E + + P +++ G L D+ E + RL+L SGKV ++ + K + I +EQL PFP V+ + PN Sbjct: 749 NWTVANLTSAAQYFHILRRQAKMLLREEIRPLVIMTPKSLLRNPNTVSEVQELSESRFQPVYEQSG-----LSHDY-------EKVTRLVLSSGKVSIDISDHFNKLEDGKEWLHIARIEQLYPFPAKGVKELFAKLPN 875 HSP 2 Score: 59.3066 bits (142), Expect = 1.146e-22 Identity = 23/42 (54.76%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSS R+ERFL ++ +N + + + Sbjct: 714 QKSGLVMLLPHGYEGQGPEHSSGRIERFLQLAAENNWTVANL 755
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCTU (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis GN=kgd PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 1.485e-22 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S + +F +++ ++ T++ I D N S R++L SGK+YYEL + K + +D+AI +EQL P P ++ L RY N Sbjct: 1047 STPSNYFHLLRRHALDGIQRPLIVFTPKSMLRHKAAVSEIKDFTEIKFRSVLEEP--TYEDGIGDRNKVS-------RILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYEN 1164 HSP 2 Score: 48.1358 bits (113), Expect = 1.485e-22 Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+SAR+ERFL + Sbjct: 1007 SNVVLLLPHGHEGQGPDHTSARIERFLQL 1035
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCTA (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.485e-22 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S + +F +++ ++ T++ I D N S R++L SGK+YYEL + K + +D+AI +EQL P P ++ L RY N Sbjct: 1047 STPSNYFHLLRRHALDGIQRPLIVFTPKSMLRHKAAVSEIKDFTEIKFRSVLEEP--TYEDGIGDRNKVS-------RILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYEN 1164 HSP 2 Score: 48.1358 bits (113), Expect = 1.485e-22 Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+SAR+ERFL + Sbjct: 1007 SNVVLLLPHGHEGQGPDHTSARIERFLQL 1035
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCBP (2-oxoglutarate decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.485e-22 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S + +F +++ ++ T++ I D N S R++L SGK+YYEL + K + +D+AI +EQL P P ++ L RY N Sbjct: 1047 STPSNYFHLLRRHALDGIQRPLIVFTPKSMLRHKAAVSEIKDFTEIKFRSVLEEP--TYEDGIGDRNKVS-------RILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYEN 1164 HSP 2 Score: 48.1358 bits (113), Expect = 1.485e-22 Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+SAR+ERFL + Sbjct: 1007 SNVVLLLPHGHEGQGPDHTSARIERFLQL 1035
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: KGD_MYCBO (2-oxoglutarate decarboxylase OS=Mycobacterium bovis GN=kgd PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.485e-22 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 190 TTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 +TP++YFH+LRR ++PL V +PK++LR K S + +F +++ ++ T++ I D N S R++L SGK+YYEL + K + +D+AI +EQL P P ++ L RY N Sbjct: 1047 STPSNYFHLLRRHALDGIQRPLIVFTPKSMLRHKAAVSEIKDFTEIKFRSVLEEP--TYEDGIGDRNKVS-------RILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYEN 1164 HSP 2 Score: 48.1358 bits (113), Expect = 1.485e-22 Identity = 18/29 (62.07%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 15 SGLVVMLPHGYDGQGPEHSSARLERFLHM 101 S +V++LPHG++GQGP+H+SAR+ERFL + Sbjct: 1007 SNVVLLLPHGHEGQGPDHTSARIERFLQL 1035
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACCQ (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain Q1) GN=odhA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.283e-22 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQ---IHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYY----ELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N+T+ A YFH+LRRQ + +PL +M+PK+LLR S S+ + + P +++ K + RL+L +GK+ E+ + +++ +I I +EQL PFP + VQ +KR+ N Sbjct: 744 NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGMK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKN 872 HSP 2 Score: 58.9214 bits (141), Expect = 3.283e-22 Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSSAR ERFL ++ +N + + + Sbjct: 709 QKSGLVLLLPHGYEGQGPEHSSARPERFLQLAAENNWTVANL 750
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACC7 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain AH187) GN=odhA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.283e-22 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQ---IHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYY----ELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N+T+ A YFH+LRRQ + +PL +M+PK+LLR S S+ + + P +++ K + RL+L +GK+ E+ + +++ +I I +EQL PFP + VQ +KR+ N Sbjct: 744 NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGMK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKN 872 HSP 2 Score: 58.9214 bits (141), Expect = 3.283e-22 Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSSAR ERFL ++ +N + + + Sbjct: 709 QKSGLVLLLPHGYEGQGPEHSSARPERFLQLAAENNWTVANL 750
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACA2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus amyloliquefaciens (strain FZB42) GN=odhA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.272e-22 Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FR---KPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASD--IAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N+T+ A YFH+LRRQ R +PL +M+PK+LLR S + E + + P +++ G S E + R++L SGKV ++ + K + I +EQL PFP + + PN Sbjct: 749 NWTVANLTSAAQYFHILRRQAKMLLREEIRPLVIMTPKSLLRNPNTVSEVQELSESRFKPVYEQSGL------------SHAYEKVTRVVLSSGKVSIDISDHFNKMEGDKDWLHIARIEQLYPFPAKDTKELFAKLPN 875 HSP 2 Score: 58.9214 bits (141), Expect = 4.272e-22 Identity = 23/42 (54.76%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 9 RQSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVIPEM 134 ++SGLV++LPHGY+GQGPEHSS R+ERFL ++ +N + + + Sbjct: 714 QKSGLVMLLPHGYEGQGPEHSSGRVERFLQLAAENNWTVANL 755 The following BLAST results are available for this feature:
BLAST of CF834875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834875 ID=CF834875; Name=CF834875; organism=Citrus sinensis; type=EST; length=571bpback to top |