CF834875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_OCEIH (2-oxoglutarate dehydrogenase E1 component OS=Oceanobacillus iheyensis GN=odhA PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 6.311e-20 Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 QSGLVVMLPHGYDGQGPEHSSARLERFLHMSDDNPYVI 125 +S +V++LPHGY+GQGPEHSSARLERFL M+ +N +++ Sbjct: 715 KSNMVLLLPHGYEGQGPEHSSARLERFLQMAAENNWIV 752 HSP 2 Score: 58.151 bits (139), Expect = 6.311e-20 Identity = 44/145 (30.34%), Postives = 69/145 (47.59%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FR---KPLSVMSPK-NLLRRKECKSNLSEFDD-----VQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*R--KKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + NVT+ A FH+LRRQ R +PL +M+PK +L+R + EF D ++ PGF+ E + RL++ SGK+ ++ E + + I VEQ+ PFP ++ E+K+ PN Sbjct: 749 NWIVANVTSSAQLFHILRRQAAMRDRDEARPLVLMTPKSSLIRHPRMGATAEEFTDGGFLALRDQPGFEAN-----------------REKVTRLVVGSGKMMIDIEEAMDDSDETYDWLQIKRVEQIYPFPKKALEEEIKQLPN 876
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_SCHPO (2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=kgd1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.955e-19 Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 145 LQTRIQKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDL--EEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 LQ + Q CN + VT P+ YFH LRR IH FRKPL + K+LLR +S + EFD+ G FK ++++ + E I +LI+CSG+V+ L + R+++ +IAI VEQL PF + + + +YPN Sbjct: 807 LQRQHQDCNIQAIYVTKPSQYFHALRRNIHRQFRKPLVIFFSKSLLRHPAARSTIDEFDEKHG----------FKLILEEEEHGKSILPPEKIEKLIICSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPN 940
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_DANRE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Danio rerio GN=dhtkd1 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RK--KHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 N +VN T PA YFH+LRRQ+ FRKPL V SPK LLR S LS+ GT+FK +I D S + R++ CSGK YY L + R+ + + A+ VE+LCPFP + +Q+EL +Y N Sbjct: 734 NMAVVNPTLPAQYFHLLRRQMIRNFRKPLIVASPKTLLRFSGAVSGLSDMG----------PGTSFKPII---GDSSVNPASVQRVLFCSGKHYYALLKHRETIPEAEKNTALVRVEELCPFPTEALQQELNKYTN 856
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_YEAST (2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=KGD1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.823e-18 Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 145 LQTRIQKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKD--HNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 LQ + Q CN+ +V TTPA+ FH+LRRQ H FRKPL++ K LLR +S+LSEF + F+ +I+D H +E RL+L SG+VY L++ R+ A +EQL PFP+ ++ L YPN Sbjct: 809 LQRQHQDCNFQVVYPTTPANLFHILRRQQHRQFRKPLALFFSKQLLRHPLARSSLSEFTE-----------GGFQWIIEDIEHGKSIGTKEETKRLVLLSGQVYTALHKRRESLGDKTTAFLKIEQLHPFPFAQLRDSLNSYPN 941
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: DHTK1_CAEEL (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Caenorhabditis elegans GN=ZK836.2 PE=2 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 160 QKCNWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASD-IAICMVEQLCPFPYDLVQRELKRYP 567 + N + N TT A YFH+LRRQ+ +RKPL V+ PK LLR + S ++EF GTT++ +I + +H+ + I ++I SGK + + + R + D +AI VE LCPFP +Q LK+YP Sbjct: 722 ENVNMRVANPTTSAQYFHLLRRQVVPNYRKPLIVVGPKILLRHPKAASTINEFG----------PGTTYQNVISE--EHATSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYP 846
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_CORGL (2-oxoglutarate dehydrogenase E1 component OS=Corynebacterium glutamicum GN=odhA PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 139 ATLQTRIQKC---NWHIVNVTTPASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 A ++ +Q C + + +TPA++FH+LRR ++PL + +PK++LR K S +F +V T F+ +I D N + + +++L SGK+YYEL + ++K DIAI +E L P P++ + L YPN Sbjct: 1056 ARIERFLQLCAEGSMTVAQPSTPANHFHLLRRHALSDLKRPLVIFTPKSMLRNKAAASAPEDFTEV----------TKFQSVINDPNVADAAK--VKKVMLVSGKLYYELAKRKEKDGRDDIAIVRIEMLHPIPFNRISEALAGYPN 1190
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAP (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sucA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 139 ATLQTRIQKCNWHIVNVTTP---ASYFHVLRRQIHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRY 564 A L+ +Q C + + V P + FH+LRRQI KPL V++PK+LLR +S+L + FK +I N+ ++ + R+I CSGK+YY+L E R K +++ + +EQL PFP D + LK Y Sbjct: 721 ARLERFLQLCAENNIQVCIPTVSSQIFHLLRRQIFSNVYKPLIVLTPKSLLRNNVARSSLEVLVN-----------ENFKNVI---NEIDKNQKEVKRIIFCSGKIYYDLLEYRNKCDINNVLLIRIEQLYPFPKDEILTILKSY 851
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACHD (2-oxoglutarate dehydrogenase E1 component OS=Bacillus halodurans GN=odhA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQ---IHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASD---IAICMVEQLCPFPYDLVQRELKRYPN 570 NW I N T+ A YFH+LRRQ ++ +PL +M+PK+LLR ++ S++ E + FK +++ N + E + R++LCSGK+ +L + +K + D + I VEQL PFP + +Q RYPN Sbjct: 751 NWTIANCTSAAQYFHILRRQAAILNTDSVRPLIMMTPKSLLRNQKVASSVEELTTGR-----------FKTVLEQPN-LGESHEKVERIVLCSGKIAIDLQDRIEKEADKDWDWVHIVRVEQLYPFPKEPLQEIFARYPN 878
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_BACSK (2-oxoglutarate dehydrogenase E1 component OS=Bacillus clausii (strain KSM-K16) GN=odhA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.949e-12 Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQ---IHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYEL--YE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 NW + N T+ A YFH+LRRQ + +PL +M+PK+LLR + S S F + + P ++ L D N + R+ILCSGK+ EL Y + S + I VE+L PFP ++ LK +PN Sbjct: 748 NWTVANCTSAAQYFHILRRQAKILQKNTVRPLIIMTPKSLLRNQVVASPTSAFTEGEFQPILEE-----PTLGHDPN-------AVKRIILCSGKLAIELQDYVNKNDEDWSWVHIIRVEELYPFPRRAIRERLKEFPN 874
BLAST of CF834875 vs. ExPASy Swiss-Prot
Match: ODO1_STAES (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus epidermidis (strain ATCC 12228) GN=odhA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 1 Query: 169 NWHIVNVTTPASYFHVLRRQ---IHG*FRKPLSVMSPKNLLRRKECKSNLSEFDDVQGHPGFDKQGTTFKRLIKDHNDHSDLEEGIIRLILCSGKVYYELYE*RKKHSASDIAICMVEQLCPFPYDLVQRELKRYPN 570 N +VN+++ ++YFH+LR Q + +PL VMSPK+LLR K + EF FK +I + D E+ + ++IL SGK+Y +L E K+ I + VE+L PFP + ++ LK P+ Sbjct: 746 NSTVVNLSSASNYFHLLRAQAASLDTLEMRPLIVMSPKSLLRNKTVAKPIDEFTS-----------GGFKPIITEDID----EQKVKKVILASGKMYIDLKEYLAKNPNDSILLIAVERLYPFPEEEIKEVLKSLPH 867 The following BLAST results are available for this feature:
BLAST of CF834875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834875 ID=CF834875; Name=CF834875; organism=Citrus sinensis; type=EST; length=571bpback to top |