CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.460e-62
Identity = 118/144 (81.94%), Postives = 126/144 (87.50%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD  VQ DMK WPFK I    DKP I V +KGE K F+ EEISSMVL+KM+E AEAYLG TINNAV+TVPAY
Sbjct:    4 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.753e-61
Identity = 113/144 (78.47%), Postives = 126/144 (87.50%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYV F +TERLIGDAAKNQVAMNPTNT+FDAKRLIGR+FSD  +Q DMK WPFK IA   DKP + V +KGE K F+ EE+SSMVL+KM+E AEAYLG TINNAV+TVPAY
Sbjct:    5 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFSDPVIQSDMKHWPFKVIAKEGDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 8.009e-61
Identity = 110/148 (74.32%), Postives = 126/148 (85.14%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +G  +GIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D + Q D+K WPFK   G  DKP I V +KGE K F  EEISSMVLIKM+E+AEA++G  +NNAV+TVPAY
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDPATQADIKHWPFKVTPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAY 152          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.975e-60
Identity = 112/148 (75.68%), Postives = 127/148 (85.81%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF D+ VQ DMK WPFK +     +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG +INNAV+TVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFK-VISDGGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.191e-60
Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D+ VQ DMK WPF  +   A +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFT-VVNDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.191e-60
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMK WPFK +     KP + V+YKGE K F  EEISSMVL+KMREIAEAYLG  ++NAV+TVPAY
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFK-VVSDGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLAKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS7C1_DICDI1.460e-6281.94Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS7C2_DICDI2.753e-6178.47Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_ACHKL8.009e-6174.32Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP7C_ICTPU3.975e-6075.68Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_CHICK5.191e-6077.03Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_ONCTS5.191e-6076.35Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP7C_SAGOE8.855e-6076.35Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT8.855e-6076.35Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB8.855e-6076.35Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE8.855e-6076.35Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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