CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 1.977e-51
Identity = 103/144 (71.53%), Postives = 116/144 (80.56%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GIDLGTTYSCV  + +DRV+IIANDQGNRTTPSYV FTDTERLIGDAAKNQ A+NP NTVFDAKRLIGR+F D  V  D K +PFK I+    KP++ V YKGE K F  EEISSMVL KM+E AE YLG T+N+AVVTVPAY
Sbjct:    5 VGIDLGTTYSCVAHFSNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAINPHNTVFDAKRLIGRKFDDPEVTTDAKHFPFKVISRDG-KPVVQVEYKGETKTFTPEEISSMVLSKMKETAENYLGTTVNDAVVTVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.282e-50
Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GID GTTYSCV  + +DRV+IIANDQGNRTTPS+V FTDTERL GDAAKNQ AMNP NTVFDAKRLIGR+F D  VQGD+K +PFK +   + KP I V +KGE K F  EEISSMVL KM+E AE++LG T+ +AV+TVPAY
Sbjct:    5 VGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQGDIKHFPFK-VVDKSGKPQIQVEFKGETKVFTPEEISSMVLTKMKETAESFLGTTVKDAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.674e-50
Identity = 99/144 (68.75%), Postives = 115/144 (79.86%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GIDLGTTYSCV  + +DRV+IIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F D  VQ D+K +PFK +     KP I V +KGE K F  EEISSMVL KM+E AE+Y+G  + +AV+TVPAY
Sbjct:    5 VGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQNDIKHFPFK-VVEKGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 2.855e-50
Identity = 99/144 (68.75%), Postives = 113/144 (78.47%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GIDLGTTYSCV  + +DRV+IIANDQGNRTTPSYV FTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F D  V  D K +PFK +     KP++ V YKGE K F  EEISSM+L KM+E AE +LG  + +AVVTVPAY
Sbjct:    5 VGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAKRLIGRKFDDPEVTNDAKHYPFK-VIDKGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.729e-50
Identity = 101/149 (67.79%), Postives = 120/149 (80.54%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLG-ATINNAVVTVPAY 580
            + P +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKN+ A NP  ++ DAKRLIGR FSDT+V+ DMK WPF  +     +P I + +KGE K F AEEISSMVL+KM+E AEAYLG  ++ +AVVTVPAY
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNKTASNPYRSL-DAKRLIGRNFSDTNVKADMKHWPFT-VIEEGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.361e-50
Identity = 101/146 (69.18%), Postives = 116/146 (79.45%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P IGIDLGTTYSCVG+++ DR++IIAN+QGNR TPS+V FTDTERLIGDAAKNQVAMNP  TVF+AKRLIGR+F+D  VQ DMK +PFK I      P I V ++GE K F  E ISSM   K REIAE+YLG T+NNAVVTVPAY
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANEQGNRNTPSFVAFTDTERLIGDAAKNQVAMNP-QTVFEAKRLIGRKFADPEVQADMKHFPFK-ITDKGGNPKIQVEFRGEGKHFTPEGISSMFRRKKREIAESYLGGTVNNAVVTVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS7C4_DICDI (Heat shock cognate 70 kDa protein 4 OS=Dictyostelium discoideum GN=DDB_G0293678 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.851e-49
Identity = 99/148 (66.89%), Postives = 117/148 (79.05%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVW-QHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGP-ADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P +GIDLGTTYSCVGV  +  R++IIANDQGNRTTPSYV F + E LIGD A NQVAMNP NT+FD KRL GR++SD+ VQ DMKLWPFK IA    DKP+I V++KGE K F+ EEISSMVL KM+EI E +LG  + +AV+TVPAY
Sbjct:    2 PSMGIDLGTTYSCVGVCNEKGRIEIIANDQGNRTTPSYVSFNNRECLIGDDAMNQVAMNPVNTIFDVKRLFGRKYSDSVVQSDMKLWPFKVIANKFDDKPLIQVDFKGETKTFSPEEISSMVLSKMKEIVEQHLGEPVTDAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.567e-48
Identity = 97/144 (67.36%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV VW+   V+II NDQG RTTPS+V FT+TERL+GDAAKNQ AMNP NTVFDAKRLIGRR+ D   Q D+K WPFK I      P I VNY GE+KQF A+EIS+MVL KM+EI+EA L   +  AV+TVPAY
Sbjct:    9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNG-IPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 2.046e-48
Identity = 95/147 (64.63%), Postives = 112/147 (76.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV Q  +V+I+ NDQGNR TPSYV FTD ERL+GDAAKNQ A NP  T+FD KRLIGR+FSD  VQ D+K +P+K +    DKP++ V  KGEEK F  EEIS+M+L KM+E AE YLG  + +AVVTVPAY
Sbjct:   39 GTVIGIDLGTTYSCVGVMQKGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQAAANPHRTIFDIKRLIGRKFSDKDVQNDIKHFPYK-VVSKDDKPVVKVEVKGEEKTFTPEEISAMILGKMKETAEGYLGKKVTHAVVTVPAY 184          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.046e-48
Identity = 97/150 (64.67%), Postives = 116/150 (77.33%), Query Frame = 2
Query:  131 KGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            K  G  IGIDLGTTYSCVGV++  +V+II NDQGNR TPSYV FT+TERLIG+AAKNQ  +NP NT+FD KRLIGRRF D  VQ DMKL P+K I    +KP + V  KGEEK ++ EEIS+M+L +M+EIAEA LG T+ +AVVT PAY
Sbjct:   29 KDYGSVIGIDLGTTYSCVGVFKKGKVEIIPNDQGNRITPSYVAFTETERLIGEAAKNQATLNPENTIFDIKRLIGRRFDDEEVQRDMKLLPYK-IVSKNNKPYVVVKVKGEEKTYSPEEISAMILGRMKEIAEASLGKTVTHAVVTCPAY 177          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP73_YEAST1.977e-5171.53Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP72_PICAN1.282e-5068.75Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP71_PICAN1.674e-5068.75Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP74_YEAST2.855e-5068.75Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP72_PARLI3.729e-5067.79Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP71_PARBA6.361e-5069.18Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HS7C4_DICDI1.851e-4966.89Heat shock cognate 70 kDa protein 4 OS=Dictyosteli... [more]
HSP75_SCHPO1.567e-4867.36Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
GRP78_NEUCR2.046e-4864.6378 kDa glucose-regulated protein homolog OS=Neuros... [more]
BIP2_DICDI2.046e-4864.67Luminal-binding protein 2 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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