CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 7.775e-48
Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTE--RLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV F+  +  RLIGDAAKNQ+ +NP NT+FDAKRLIGR ++D +VQ D+K WPFK +   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  + NAVVTVPAY
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFK-VIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAY 180          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.775e-48
Identity = 101/154 (65.58%), Postives = 120/154 (77.92%), Query Frame = 2
Query:  125 AGKGE-GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GK E G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV F+ D ERLIGDAAKNQ+  NP NT+FDAKRLIGR + D  VQGD+K +PFK +    +KP + V    EEK FA EE+S+MVL KM+EIAEAYLG  + +AVVTVPAY
Sbjct:   22 SGKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAKRLIGRDYDDKDVQGDIKRYPFK-VINKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAY 174          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.015e-47
Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  +++  V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF + SVQ DMK WPFK +    D P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  +  AVVTVPAY
Sbjct:   10 IGIDLGTTYSCVATYENS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAKRLIGRRFDEESVQSDMKTWPFK-VIDSNDAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.015e-47
Identity = 101/154 (65.58%), Postives = 120/154 (77.92%), Query Frame = 2
Query:  125 AGKGE-GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GK E G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV F+ D ERLIGDAAKNQ+  NP NT+FDAKRLIGR + D  VQGD+K +PFK +    +KP + V    EEK FA EE+S+MVL KM+EIAEAYLG  + +AVVTVPAY
Sbjct:   22 SGKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAKRLIGRDYHDKDVQGDIKRYPFK-VINKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAY 174          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.955e-47
Identity = 93/149 (62.42%), Postives = 118/149 (79.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTE--RLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV F+  +  RLIGDAAKNQ+ +NP NT+FDAKRLIGR ++D +VQ D+K WPFK +   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  + +AVVTVPAY
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFK-VLDKSNKPSVEVKVGADNKQFTPEEVSAMVLVKMKEIAESYLGKEVKHAVVTVPAY 180          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 2.955e-47
Identity = 96/144 (66.67%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF + SVQ DMK WPFK +      P+I V Y GE KQF+ +EISSMVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAKRLIGRRFDEESVQNDMKTWPFK-VVDVEGAPVIEVEYLGETKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 2.955e-47
Identity = 96/144 (66.67%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF + SVQ DMK WPFK +      P+I V Y GE KQF+ +EISSMVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAKRLIGRRFDEESVQNDMKTWPFK-VVDVDGAPVIEVEYLGENKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 2.955e-47
Identity = 96/144 (66.67%), Postives = 110/144 (76.39%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF D SVQ DMK WPFK +      PMI V Y GE K F+ +EIS+MVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDAKRLIGRRFDDESVQSDMKTWPFK-VIDANGSPMIEVEYLGETKSFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 5.040e-47
Identity = 98/148 (66.22%), Postives = 116/148 (78.38%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMKL P+K I     KP I V  K GE K F+ EEIS+M+L KM++ AEAYLG  IN+AVVTVPAY
Sbjct:   33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFADKEVQRDMKLVPYK-IINKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAY 179          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.582e-47
Identity = 96/144 (66.67%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  +++  V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF + SVQ DMK WPFK +      P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  +  AVVTVPAY
Sbjct:   10 IGIDLGTTYSCVATYENS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAKRLIGRRFDEESVQSDMKTWPFK-VIDSNGAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAY 151          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_CAEEL7.775e-4863.09Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
GRP78_ECHMU7.775e-4865.5878 kDa glucose-regulated protein OS=Echinococcus m... [more]
HSP75_KLULA1.015e-4767.36Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
GRP78_ECHGR1.015e-4765.5878 kDa glucose-regulated protein OS=Echinococcus g... [more]
HSP7C_CAEBR2.955e-4762.42Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP75_KLUDE2.955e-4766.67Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
HSP75_CANGA2.955e-4766.67Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]
HSP75_ASHGO2.955e-4766.67Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]
BIP2_MAIZE5.040e-4766.22Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
HSP75_KLUMA6.582e-4766.67Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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