CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.582e-47
Identity = 98/148 (66.22%), Postives = 115/148 (77.70%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F D  VQ DMKL P+K I     KP I V  K GE K F+ EEIS+M+L KM++ AEAYLG  IN+AVVTVPAY
Sbjct:   33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYK-IINKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAY 179          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 8.597e-47
Identity = 100/148 (67.57%), Postives = 115/148 (77.70%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NTVFDAKRLIGR +SDT+VQ D+K +PFK +     KP I V+     K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   29 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFK-VVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.123e-46
Identity = 95/149 (63.76%), Postives = 117/149 (78.52%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT--ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV F+    ERLIGDAAKNQ+ +NP NT+FDAKRLIGR +++ +VQ D+K WPFK I   ++KP + V    E KQF  EE+S+MVL KM++IAE+YLG  + NAVVTVPAY
Sbjct:   30 GTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFK-IVDKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAY 177          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.466e-46
Identity = 98/148 (66.22%), Postives = 114/148 (77.03%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+VGFTD+ERLIG+AAKNQ A+NP  TVFD KRLIGR+F D  VQ D KL P++ I     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  I +AVVTVPAY
Sbjct:   35 GSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQ-IVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAY 181          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.466e-46
Identity = 98/148 (66.22%), Postives = 114/148 (77.03%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+VGFTD+ERLIG+AAKNQ A+NP  TVFD KRLIGR+F D  VQ D KL P++ I     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  I +AVVTVPAY
Sbjct:   35 GSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQ-IVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAY 181          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.267e-46
Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCV V ++ + +I+AN+QGNR TPSYV FTD ERLIGDAAKNQ+A NPTNT+FD KRLIG +F+D SVQ D+K  PFK +     KP++ V  KGE++ F  EEIS M+L KM++IAE YLG  + +AVVTVPAY
Sbjct:   36 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQIAANPTNTIFDIKRLIGLKFNDRSVQRDIKHLPFK-VVDKDGKPVVQVKVKGEDRVFTPEEISGMILGKMKQIAEDYLGKKVTHAVVTVPAY 181          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.266e-46
Identity = 97/148 (65.54%), Postives = 113/148 (76.35%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+V FTD ERLIG+AAKN  A+NP  T+FD KRLIGR+F D  VQ DMKL P+K I     KP I V  K GE K F+ EEIS+M+L KM+E AEA+LG TI +AVVTVPAY
Sbjct:   36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDNERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYK-IVSKDGKPYIQVKIKDGEVKVFSPEEISAMILTKMKETAEAFLGKTIKDAVVTVPAY 182          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 7.277e-46
Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF D SVQ D K WPFK +      P++ V Y GE K F+ +EISSMVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPENTVFDAKRLIGRRFDDESVQKDRKTWPFK-LIDVEGNPVVEVQYLGETKTFSPQEISSMVLTKMKEIAEAKIGQKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.277e-46
Identity = 97/148 (65.54%), Postives = 115/148 (77.70%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   + K FA EEIS+MVL+KM+E AEAYLG  + +AVVTVPAY
Sbjct:   30 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFK-VIEKKTKPYIEVDIGDQMKTFAPEEISAMVLVKMKETAEAYLGRKVTHAVVTVPAY 176          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.277e-46
Identity = 98/148 (66.22%), Postives = 111/148 (75.00%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++ RV IIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NT+FD KRLIGR F D SVQ D+K +PFK +    +KP I       ++ FA EEIS+MVL KMR+IAE YLG  I NAVVTVPAY
Sbjct:   38 GTVIGIDLGTTYSCVGVFKNGRVDIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTSNPENTIFDVKRLIGRTFDDKSVQHDIKFYPFK-VTNANNKPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAY 184          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP3_MAIZE6.582e-4766.22Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSP7C_DROME8.597e-4767.57Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
HSP7D_CAEEL1.123e-4663.76Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
BIP2_ARATH1.466e-4666.22Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH1.466e-4666.22Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
GRP78_CANGA3.267e-4662.5978 kDa glucose-regulated protein homolog OS=Candid... [more]
BIP_SOLLC4.266e-4665.54Luminal-binding protein OS=Solanum lycopersicum PE... [more]
HSP75_ZYGRC7.277e-4665.28Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
GRP78_XENLA7.277e-4665.5478 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_APLCA7.277e-4666.2278 kDa glucose-regulated protein OS=Aplysia califo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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