CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.505e-46
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+V FTD ERLIG+AAKN  A+NP  TVFD KRLIGR+F D  VQ DMKL P+K I     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  I +AVVTVPAY
Sbjct:   37 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDGERLIGEAAKNLAAVNPERTVFDVKRLIGRKFDDKEVQRDMKLVPYK-IVNKDGKPYIQVKIKDGETKIFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAY 183          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.117e-45
Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF D SVQ DMK WPFK +      P+I V Y  E K F+ +EIS+MVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPQERLIGDAAKNQAALNPRNTVFDAKRLIGRRFDDESVQKDMKTWPFK-VIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.117e-45
Identity = 94/144 (65.28%), Postives = 109/144 (75.69%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  ++   V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGRRF D SVQ DMK WPFK +      P+I V Y  E K F+ +EIS+MVL KM+EIAEA +G  +  AV+TVPAY
Sbjct:   10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDAKRLIGRRFDDESVQKDMKTWPFK-VIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.117e-45
Identity = 96/148 (64.86%), Postives = 112/148 (75.68%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV+++  V+IIANDQGNR TPS+V FTD ERLIG+AAKNQ A+NP  T+FD KRLIGR+F D  VQ D KL P++ I     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  I +AVVTVPAY
Sbjct:   36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEVQRDKKLVPYE-IVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAY 182          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 176          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 99/149 (66.44%), Postives = 116/149 (77.85%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +   A KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   26 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKA-KPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 173          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP4_TOBAC9.505e-4666.22Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
HSP76_YEAST2.117e-4565.28Heat shock protein SSB2 OS=Saccharomyces cerevisia... [more]
HSP75_YEAST2.117e-4565.28Heat shock protein SSB1 OS=Saccharomyces cerevisia... [more]
BIP5_TOBAC2.117e-4564.86Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
GRP78_SPETR3.612e-4565.7778 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_RAT3.612e-4565.7778 kDa glucose-regulated protein OS=Rattus norvegi... [more]
GRP78_MOUSE3.612e-4565.7778 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU3.612e-4565.7778 kDa glucose-regulated protein OS=Mesocricetus a... [more]
GRP78_HUMAN3.612e-4565.7778 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_CHICK3.612e-4566.4478 kDa glucose-regulated protein OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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