CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.612e-45
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 176          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.717e-45
Identity = 91/147 (61.90%), Postives = 111/147 (75.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCV V ++ + +I+AN+QGNR TPSYV FTD ERLIGDAAKNQVA NP NT+FD KRLIG +++D SVQ D+K  PF  +     KP + V+ KGE+K F  EEIS M+L KM++IAE YLG  + +AVVTVPAY
Sbjct:   50 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPF-NVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAY 195          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.161e-45
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCV  +    V+IIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDAKRLIGR F D SVQ D+K WPFK +     +P+I V Y  E K F+ +EISSMVL KM+EIAEA +G  +  AVVTVPAY
Sbjct:   10 IGIDLGTTYSCVATYD-SAVEIIANEQGNRVTPSFVAFTSEERLIGDAAKNQAALNPKNTVFDAKRLIGRAFDDESVQKDIKSWPFK-VVESNGQPLIEVEYLDETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.046e-45
Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV +  RV+I+ANDQG+R TPSYV FT+ ERL+GDAAKNQ A NP NT+FD KRLIG ++ D SVQ D+K +P+K +     KP++ V  KGE+K +  EEIS+M+L KM++IA+ YLG  + +AVVTVPAY
Sbjct:   37 GTVIGIDLGTTYSCVGVMKGGRVEILANDQGSRITPSYVAFTEDERLVGDAAKNQAANNPFNTIFDIKRLIGLKYKDESVQRDIKHFPYK-VKNKDGKPVVVVETKGEKKTYTPEEISAMILTKMKDIAQDYLGKKVTHAVVTVPAY 182          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.046e-45
Identity = 90/147 (61.22%), Postives = 110/147 (74.83%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV +  RV+II NDQGNR TPSYV FT+ ERL+GDAAKNQ+A NPTNT+FD KRLIG RF D  +Q ++K  P+K +     +P++     GE K F AEEIS+M+L KM++IAE YLG  + +AVVTVPAY
Sbjct:   40 GTVIGIDLGTTYSCVGVMKAGRVEIIPNDQGNRITPSYVAFTEDERLVGDAAKNQIASNPTNTIFDIKRLIGHRFDDKVIQKEIKHLPYK-VKDQDGRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAY 185          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.372e-44
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNY-KGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  +GIDLGTTYSCVGV+++ RV+IIANDQGNR TP YV FT + ERLIGDAAKNQ+  NP NTVFDAKRLIGR ++D SVQ D+K  PFK +     KP I V+   G+ K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAY
Sbjct:   28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPPYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFK-VVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCV V ++ RV+IIANDQGNR TPSYV FT+ ERL+G+AAKNQ   NP NT+FD KRLIGR+F + ++  D+K +PF  I    ++P++ VN  G++K+F  EEIS+M+L KM++ AEAYLG  + +AVVTVPAY
Sbjct:   35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFH-IVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAY 180          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.341e-44
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVN-YKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV++  +V+IIANDQGNR TPS+V FT+ ERLIG+AAKNQ A NP  T+FD KRLIGR+F D  VQ DMKL P+K I     KP I V   +GE K F+ EEIS+M+L KM+E AE +LG  I +AVVTVPAY
Sbjct:   36 GTVIGIDLGTTYSCVGVYKDGKVEIIANDQGNRITPSWVAFTNDERLIGEAAKNQAAANPERTIFDVKRLIGRKFEDKEVQKDMKLVPYK-IVNRDGKPYIQVKVQEGETKVFSPEEISAMILTKMKETAETFLGKKIKDAVVTVPAY 182          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.058e-44
Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCV V ++ + +I+AN+QGNR TPSYV FTD ERLIGDAAKNQ A NP NT+FD KRLIG +++D +VQ D+K  P+  +    +KP + V  KGE+K+F  EE+S M+L KM++IAE YLG  + +AVVTVPAY
Sbjct:   51 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIKRLIGLQYNDPTVQRDIKHLPYT-VVNKGNKPYVEVTVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTVPAY 196          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.162e-43
Identity = 89/147 (60.54%), Postives = 106/147 (72.11%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTTYSCVGV Q+ +V+I+ NDQGNR TPSYV FTD ERL+GDAAKNQ A NP  T+FD KRLIGR+F D  VQ D K +P+K +     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAY
Sbjct:   49 GTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYK-VVNKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAY 194          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_BOVIN3.612e-4565.7778 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
GRP78_YEAST4.717e-4561.9078 kDa glucose-regulated protein homolog OS=Saccha... [more]
HSP75_CANAL6.161e-4565.28Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]
GRP78_YARLI8.046e-4560.5478 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_PICAN8.046e-4561.2278 kDa glucose-regulated protein homolog OS=Pichia... [more]
GRP78_PONAB1.372e-4465.1078 kDa glucose-regulated protein OS=Pongo abelii G... [more]
GRP78_SCHPO1.792e-4459.1878 kDa glucose-regulated protein homolog OS=Schizo... [more]
BIP_SPIOL2.341e-4463.51Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
GRP78_KLULA3.058e-4459.1878 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_ASPNG1.162e-4360.5478 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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