CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 8.855e-60
Identity = 113/148 (76.35%), Postives = 124/148 (83.78%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DMK WPF  +   A +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFM-VVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.156e-59
Identity = 113/153 (73.86%), Postives = 127/153 (83.01%), Query Frame = 2
Query:  122 MAGKGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            M  K EG  IGIDLGTTYSCVGVW HDRV++IANDQGNRTTPSYV FT+TERLIGD+AKNQVAMNP NTVFDAKRLIGRRF D +VQ D+K +PFK I    DKP + V YKGE K FA EEISSMVL+KM+EIAE++LG  + NAV+TVPAY
Sbjct:    1 MENKIEGVAIGIDLGTTYSCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAKRLIGRRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYKGETKIFAPEEISSMVLLKMKEIAESFLGKEVKNAVITVPAY 153          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 2.576e-59
Identity = 112/148 (75.68%), Postives = 126/148 (85.14%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ DMK WPF+ +   + +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG T+NNAVVTVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPCNTVFDAKRLIGRRFDDGVVQSDMKHWPFE-VINDSTRPKLQVEYKGETKSFYPEEISSMVLVKMKEIAEAYLGKTVNNAVVTVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.365e-59
Identity = 112/144 (77.78%), Postives = 122/144 (84.72%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ++RV IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D+ VQ DMK WPFK      DKPMI V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +  AVVTVPAY
Sbjct:    7 IGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 4.395e-59
Identity = 112/146 (76.71%), Postives = 127/146 (86.99%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P IGIDLGTTYSCVG+++ DR++IIANDQGNRTTPS+V FTDTERLIGDAAKNQVAMNP+NTVFDAKRLIGR+F+D  VQ DMK +PFK +   A KP+I V +KGEEKQF  EEISSMVL KMRE AE+YLG T+NNAVVTVPAY
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFK-VIDKAGKPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 7.496e-59
Identity = 110/144 (76.39%), Postives = 125/144 (86.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ++RV+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD+ VQ DMK WPFK +    DKP+I V ++GE K F  EEISSMVL+KM+E+AE+YLG  +  AVVTVPAY
Sbjct:    7 IGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAVVTVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 9.790e-59
Identity = 111/148 (75.00%), Postives = 123/148 (83.11%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DM  WPF  +     +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+NNAV+TVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDHVVQSDMNDWPF-NVINDNTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVNNAVITVPAY 149          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_HUMAN8.855e-6076.35Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE8.855e-6076.35Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR8.855e-6076.35Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN8.855e-6076.35Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_PYRSA1.156e-5973.86Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_ONCMY2.576e-5975.68Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_LEIDO3.365e-5977.78Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP72_PARBA4.395e-5976.71Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP74_TRYBB7.496e-5976.39Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP7C_ORYLA9.790e-5975.00Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
back to top