CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 9.790e-59
Identity = 110/147 (74.83%), Postives = 124/147 (84.35%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQ DMK WPF+ +     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAY
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFR-VVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 9.790e-59
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMK WPFK      DKP+I V Y+GEEK F  E+ISSMVL+KM+E AEAYLG  +  AVVTVPAY
Sbjct:    7 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.279e-58
Identity = 111/146 (76.03%), Postives = 123/146 (84.25%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P +GIDLGTTYSCVGV++ DR+ IIANDQGNRTTPS+V FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ DMK WPFK +   + KP+I V +KGE KQF  EEISSMVL KMRE AEA+LG T+NNAV+TVPAY
Sbjct:    3 PAVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFK-VVDKSGKPIIEVEFKGETKQFTPEEISSMVLTKMRETAEAFLGGTVNNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.279e-58
Identity = 110/149 (73.83%), Postives = 124/149 (83.22%), Query Frame = 2
Query:  134 GEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G+GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR++ D +VQ DMK WPF+ +     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +  AV+TVPAY
Sbjct:    3 GKGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFR-VVNEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 1.670e-58
Identity = 110/147 (74.83%), Postives = 123/147 (83.67%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQ DMK WPF+ +     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  + +AV+TVPAY
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFR-VVSEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 1.670e-58
Identity = 116/150 (77.33%), Postives = 126/150 (84.00%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGA--TINNAVVTVPAY 580
            E P IGIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP +TVFDAKRLIGR+FSD  VQ D+KLWPF+  AG  D P I V+YK EEK F AEEISSMVLIKM+E A+A LGA   +  AVVTVPAY
Sbjct:    4 EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISSMVLIKMKETAQASLGADREVKKAVVTVPAY 153          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.181e-58
Identity = 110/147 (74.83%), Postives = 123/147 (83.67%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQ DMK WPF+ +     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  + +AV+TVPAY
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFR-VVSEGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 2.181e-58
Identity = 110/147 (74.83%), Postives = 123/147 (83.67%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            GP IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQ DMK WPF+ +     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  + +AV+TVPAY
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFR-VVSEGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.181e-58
Identity = 109/146 (74.66%), Postives = 126/146 (86.30%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P +GIDLGTTYSCVG+++ DR++IIANDQGNRTTPS+V FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMK +PFK +   + KP++ V +KGEEKQF  EEISSMVL KMRE AEAYLG T+NNAV+TVPAY
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFK-VVEKSGKPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.181e-58
Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVWQ++R+ IIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D+ VQ DMK WPFK      DKP+I V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +  AVVTVPAY
Sbjct:    7 IGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAY 150          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_HUMAN9.790e-5974.83Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_LEIAM9.790e-5977.08Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_EMENI1.279e-5876.03Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_CHICK1.279e-5873.83Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP72_RAT1.670e-5874.83Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP70_CHLRE1.670e-5877.33Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP72_CAPHI2.181e-5874.83Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN2.181e-5874.83Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_TRIRU2.181e-5874.66Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_LEIMA2.181e-5876.39Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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