CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F ++ERL+G  AK Q   NP NT++  KRLIGR F+D  V+ D  L P+  +        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWV----EADNNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPG (Chaperone protein dnaK OS=Pseudomonas putida (strain GB-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K + G      +    +   K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSILENGNVKVIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEEVVQKDIKLVPYKIVKGGNGDAWV----QAGGKDMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPF (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf0-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 69/148 (46.62%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V ++ + ++I N +G RTTPS + +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K +        +    +   KQ A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSVLENGKAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEEVVQKDIKLVPYKIVKANNGDAWV----EASGKQMAPPQISAEVLKKMKKTAEDYLGEAVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +      +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D  + P+K I   AD     ++ KG+  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDEAIMPYKIIG--ADNGDAWIDVKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V    + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D  + P+K +A       + V    ++++ A  +IS+ VL KM++ AE +LG T+  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVMDGGKARVLENAEGDRTTPSIIAYTQDGEVLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDAEAQRDKDIMPYKIVAADNGDAWVEV----KDQKIAPPQISAEVLKKMKKTAEDFLGETVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLFF (Chaperone protein dnaK OS=Chlamydophila felis (strain Fe/C-56) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++I + +G RTTPS V F  +E L+G  AK Q   NP  T+   KR IGR++S+  V+ ++K  P+K  +G     +  V    E KQ+  EEI + +L+KM+E AEAYLG TI  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQAKVITSSEGTRTTPSIVAFKGSETLVGIPAKRQAVTNPEKTLASTKRFIGRKYSE--VESEIKTVPYKVTSGSNGDAVFQV----EGKQYTPEEIGAHILMKMKETAEAYLGETITEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7M_DICDI (Heat shock 70 kDa protein, mitochondrial OS=Dictyostelium discoideum GN=mhsp70 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  131 KGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            K  G  IGIDLGTT SCV V Q    +++ N +G RTTPS V FT D ++++G  AK Q+  N  NT+F  KRLIGRRF D   + DM + P+K + GP       V  KG  K  +  E  +MVL KM+E AE  LG  + +AV+TVPAY
Sbjct:   27 KISGQVIGIDLGTTNSCVAVMQGAEARVLENAEGGRTTPSVVAFTEDNQKIVGLPAKRQMVTNAENTLFATKRLIGRRFDDPMTKKDMTMVPYKIVKGPNGDAWFEV--KG--KMISPSEAGAMVLQKMKETAETNLGGPVTDAVITVPAY 173          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7B_ENCCU (Heat shock protein homolog ECU03_0520 OS=Encephalitozoon cuniculi GN=ECU03_0520 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTE-RLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGI-----------------AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT+SCV  +   +V++I N  G RTTPS V F +    ++G AA+N V  +P + +FDAKR+IGR F D  +Q  +K WPFK +                 +   D   I +   G+   +A  EIS  VL+ ++  AEA LG T+++AVVTVPAY
Sbjct:   14 IGIDLGTTFSCVAGYISGKVEVITNQDGERTTPSVVSFDENNCTVVGTAARNMVGSDPMSVIFDAKRMIGREFDDPKIQNAIKGWPFKVVRYNHREKREEPNKVSEGSNSYDNIAIKITRNGKTNYYAPVEISGKVLLYLKNAAEARLGGTVDSAVVTVPAY 175          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_WIGBR (Chaperone protein dnaK OS=Wigglesworthia glossinidia brevipalpis GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 66/148 (44.59%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++ +V++I N +G+RTTPS + +T + E L+G  AK Q   NP NT F  KRLIGR+F+D  VQ D+ + P+K ++  ++   + +N K +  + A  +IS+ +L KM++ AE Y+G +I  AV+TVPAY
Sbjct:    6 GNIIGIDLGTTNSCVAIIENGKVKVIENSEGDRTTPSIIAYTEENEILVGQPAKRQSVTNPKNTFFAIKRLIGRKFTDHEVQRDVNIMPYKIVS--SENGDVWLNVKNQ--KVAPPQISAEILKKMKKTAEDYIGKSITEAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_THIDA (Chaperone protein dnaK OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 68/148 (45.95%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V ++   ++I N +G RTTPS V +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+K +        + V     +K+ AA+++S+ +L KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GRIIGIDLGTTNSCVAVMENGSPKVIENAEGARTTPSIVAYAEDGEILVGAPAKRQAVTNPKNTIFAVKRLIGRRFEEKEVQKDIGLMPYKIVKADNGDAWVEV----RDKKMAAQQVSAEILRKMKKTAEDYLGEEVTEAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICFE3.072e-2842.86Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
DNAK_PSEPG3.072e-2847.30Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PSEPF3.072e-2846.62Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_ENT383.072e-2847.30Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_EDWI93.072e-2845.27Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_CHLFF3.072e-2846.53Chaperone protein dnaK OS=Chlamydophila felis (str... [more]
HSP7M_DICDI4.012e-2847.02Heat shock 70 kDa protein, mitochondrial OS=Dictyo... [more]
HSP7B_ENCCU4.012e-2841.36Heat shock protein homolog ECU03_0520 OS=Encephali... [more]
DNAK_WIGBR4.012e-2844.59Chaperone protein dnaK OS=Wigglesworthia glossinid... [more]
DNAK_THIDA4.012e-2845.95Chaperone protein dnaK OS=Thiobacillus denitrifica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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