CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SC+ + +  + +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRR+ D  VQ D+ + P+K +A  AD     +  KG+  + A  +IS+ +L KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCIAIIEGSKPRVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPQNTLFAIKRLIGRRYQDEEVQRDVSIMPYKIVA--ADNGDAWLEVKGQ--KMAPPQISAEILKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F ++ERL+G  AK Q   NP NT++  KRLIGR F+D  V+ D  L P+  +        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWV----EADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSYIN (Chaperone protein dnaK OS=Psychromonas ingrahamii (strain 37) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 71/147 (48.30%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      +II N +G RTTPS + +T+ E L+G  AK Q   NP NT+F  KRLIGRR+ D  VQ D+K+ P+K +   AD     V   G   + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSVLVGGVAKIIENAEGERTTPSIIAYTEGETLVGQPAKRQSVTNPQNTLFAIKRLIGRRYEDEEVQRDIKIMPYKIV--KADNGDAWVEAHG--NKMAPPQISAEVLKKMKKTAEDYLGEKVTGAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_NITEU (Chaperone protein dnaK OS=Nitrosomonas europaea GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V + ++ ++I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+ + P+K +   AD     +  +G  ++ A  E+S+ VLIKM++ AE YLG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAVMEGNKPKVIENAEGARTTPSIVAYAEDNEILVGASAKRQAVTNPENTLFAIKRLIGRRFDEEVVQKDISVTPYKIVR--ADNNDAWIEARG--RKIAPPEVSAQVLIKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +    ++I N +G RTTPS V FT D ERL+G  AK Q   NP  T F  KRLIGRR+ D +V+ D KL P+K +   AD     V   G  K+++  +IS+ +L KM+E AE++LG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAVMEGASPKVIENAEGARTTPSIVAFTEDGERLVGQPAKRQGVTNPERTFFAVKRLIGRRYDDPTVEKDKKLVPYKVVR--ADNGDAWVESDG--KKYSPSQISAFILQKMKETAESFLGEKVEKAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 61/147 (41.50%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F + E+L+G +AK Q   NP+NT++  KRLIGR F+D  V+ D  + P+  +        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFANGEKLVGQSAKRQAVTNPSNTIYAVKRLIGRNFTDPMVKKDQDIVPYNIVKADNGDAWV----EADSNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAY 144          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP5 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisA53) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V F+D  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D KL P+K +        +    + +   ++  ++S+ +L KM+E AEA+LGA ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADANTYSPSQVSAFILQKMKETAEAHLGAKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPW (Chaperone protein dnaK OS=Pseudomonas putida (strain W619) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 69/148 (46.62%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS V +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K +        +    +   K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSILENGNVKVIENAEGARTTPSIVAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFEEDVVQKDIKLVPYKIVKANNGDAWV----EASGKEMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +      +++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D   Q D+ + P+K IA       + V    ++++ A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTTARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDVAIMPYKIIAADNGDAWLEV----KDQKMAPPQVSAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++ ++I N +G+RTTPS V FT + E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D+K+ P+K +   AD     V   G  K+ A  E+S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVALMEGNKPRVIENAEGDRTTPSVVAFTKEGETLVGQSAKRQAITNPQNTLYAIKRLIGRRFDEEVVQRDIKMVPYKIV--KADNGDAWVEATG--KKMAPPEVSANVLRKMKKTAEDYLGEEVEAAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SODGM4.012e-2845.27Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_RICPR4.012e-2842.86Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_PSYIN4.012e-2848.30Chaperone protein dnaK OS=Psychromonas ingrahamii ... [more]
DNAK_NITEU4.012e-2847.59Chaperone protein dnaK OS=Nitrosomonas europaea GN... [more]
DNAK_AZOC54.012e-2848.97Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_RICAH5.240e-2841.50Chaperone protein dnaK OS=Rickettsia akari (strain... [more]
DNAK_RHOP55.240e-2845.27Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_PSEPW5.240e-2846.62Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_PHOLL5.240e-2844.59Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_NITOC5.240e-2847.97Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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