CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_VESOH (Chaperone protein dnaK OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT--DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV +     V+II N +G+RTTPS + +     E L+G AAK Q   NP NT++  KRLIGRRF + +VQ D+ L P+K +        +    K + K+ AA EIS+ V+ KM++ AE YLG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAIMDGGSVKIIENSEGDRTTPSIIAYPKDSEEVLVGQAAKRQAVTNPENTLYAIKRLIGRRFEEDAVQKDIDLVPYKIVKADNGDAWV----KVKNKKMAAPEISAKVIGKMKKTAEDYLGEEVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 71/149 (47.65%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +  + ++I N +G RTTPS V FTD  ERL+G  AK Q   NP+ T F  KRLIGR + D   Q D  L P+  + AG  D  +     + + KQF+  +IS+  L KM+E AE+YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTTPSIVAFTDEGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYHIVRAGNGDAWV-----EADGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_DECAR (Chaperone protein dnaK OS=Dechloromonas aromatica (strain RCB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + +  + ++I N +G RTTPS +G+T D E L G  AK Q   NP NT++  KRLIGRRF +  VQ D+ L PFK +        +    +  +K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGGQPKVIENAEGARTTPSIIGYTEDGEILCGAPAKRQAVTNPKNTLYAVKRLIGRRFEEKEVQKDISLMPFKIVKADNGDAWV----EARDKKIAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +   ++ +++ N +G+RTTPS + +T+  E L+G  AK Q   NP NT+F  KRLIGR+F D  VQ D+K+ P+  I        I V    ++++ A  +IS+ VL KM++ AE YLG +I  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGNKPRVLENSEGDRTTPSIIAYTEKGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFRDDEVQRDIKIMPYSIINSENGDAWIDV----KKQKMAPPQISAEVLKKMKKTAEDYLGESIKEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 2
Query:  125 AGKGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +G+ +G  IGIDLGTT SC+ V +  + ++I N +G RTTPS+V FT D ERL+G  AK Q   N  NT +  KRLIGRRF D  V+ D+    +K +        +      + K ++  +I + +L+KM+E AEAYL   + NAVVTVPAY
Sbjct:   47 SGEVKGAVIGIDLGTTNSCLAVMEGKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNSANTFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVS---STDGKVYSPSQIGAFILMKMKETAEAYLNTPVKNAVVTVPAY 196          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RUTMC (Chaperone protein dnaK OS=Ruthia magnifica subsp. Calyptogena magnifica GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT--DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV +     V+II N +G+RTTPS + +     E L+G  AK Q   NP NT++  KRLIGRRF + +VQ D+ L P+K +    D     V  KG  K+ AA EIS+ V+ KM++ AE YLG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAIMDGGNVKIIENSEGDRTTPSIIAYPKDSEEVLVGQPAKRQAVTNPENTLYAIKRLIGRRFDEDAVQKDINLVPYKIV--KVDNGDAWVEVKG--KKMAAPEISAKVIGKMKKTAEDYLGEEVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS V F  +E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+K    P  K      ++ E K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGSETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYK--VAPNSKG--DAVFEVENKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 66/148 (44.59%), Postives = 89/148 (60.14%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D KL P+K +        +    + + + ++  ++S+ +L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKNAKVIENSEGMRTTPSIVAVTDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 74/151 (49.01%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  131 KGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            K +G  IGIDLGTT S V V +    +II N +G RTTPS V F  D ERL+G AAK Q  +NP NT+F  KRLIGR+F+D  VQ D+K  P+K +          V  +GE  +++  +I   VL KM+E AE YL   + NAVVTVPAY
Sbjct:   38 KVKGQVIGIDLGTTNSAVAVMEGKTPKIIENAEGARTTPSVVAFAQDGERLVGIAAKRQAVVNPENTLFATKRLIGRKFTDAEVQRDIKEVPYKIVQHTNGDAW--VEARGE--KYSPAQIGGFVLGKMKETAENYLSKPVKNAVVTVPAY 184          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V   ++ ++I N +G+RTTPS + ++ D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + PF  I   AD     V  K E  + A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GRIIGIDLGTTNSCVAVLDGEKAKVIENAEGDRTTPSIIAYSQDGETLVGQPAKRQAITNPKNTLFAIKRLIGRRFEDKEVQRDIDIMPFDII--KADNGDAWVQAKDE--KLAPPQISAEVLKKMKKTAEDYLGEEVTAAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_VESOH8.937e-2846.58Chaperone protein dnaK OS=Vesicomyosocius okutanii... [more]
DNAK_METS48.937e-2847.65Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_DECAR8.937e-2845.27Chaperone protein dnaK OS=Dechloromonas aromatica ... [more]
DNAK_BUCAP8.937e-2845.27Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
HSP7E_DROME1.167e-2743.79Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]
DNAK_RUTMC1.167e-2747.95Chaperone protein dnaK OS=Ruthia magnifica subsp. ... [more]
DNAK_CHLMU1.167e-2746.53Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]
DNAK_BRAJA1.167e-2744.59Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]
HSP7M_EMENI1.525e-2749.01Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
DNAK_PSEA61.525e-2748.65Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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