CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHRSD (Chaperone protein dnaK OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 69/148 (46.62%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +      ++I N +G RTTPS + +TD  E L+G AAK Q   NP+NT++  KRLIGR+F D  VQ D+K+ P+      AD     V  KG   + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GRIIGIDLGTTNSCVAILDGGNAKVIENAEGARTTPSIIAYTDDGETLVGQAAKRQAVTNPSNTLYAIKRLIGRKFKDDVVQKDIKMVPY--TIAEADNGDAWVEVKG--NKLAPPQVSAEVLKKMKKTAEDYLGEEVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+K         +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+K         +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+K         +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.525e-27
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+K         +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XANOR (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + ++I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+  +A       +  +   + K+ A +EIS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDYLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XANOP (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + ++I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+  +A       +  +   + K+ A +EIS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDYLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XANOM (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + ++I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+  +A       +  +   + K+ A +EIS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDYLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V F+D  ERL+G  AK Q   NP  T F  KRL+GRR+ D  V+ D KL P+K +        +    + + + ++  ++S+ +L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKNSKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOFD (Chaperone protein dnaK OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 68/148 (45.95%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + +  ++I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+K  A  AD     V  +G   + A +++S+ VL KM++ AE YLG T+  AV+TVPAY
Sbjct:    2 GRIIGIDLGTTNSCVAIMEGNTPKVIENSEGARTTPSIIAYQEDGEVLVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDINLMPYKIAA--ADNGDAWVEVRG--NRMAPQQVSADVLRKMKKTAEDYLGETVTEAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHRSD1.525e-2746.62Chaperone protein dnaK OS=Chromohalobacter salexig... [more]
DNAK_CHLTR1.525e-2745.83Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB1.525e-2745.83Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA1.525e-2745.83Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT21.525e-2745.83Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_XANOR1.991e-2745.27Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOP1.991e-2745.27Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOM1.991e-2745.27Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_RHOP21.991e-2743.92Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOFD1.991e-2745.95Chaperone protein dnaK OS=Rhodoferax ferrireducens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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