CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEF5 (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + ++  V++I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D+++ P+K +    +   + VN     ++ A  +IS+ +L KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSILENGNVKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRRFDEEVVQKDIQMVPYKIVKADNNDAWVEVN----GQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_POLNA (Chaperone protein dnaK OS=Polaromonas naphthalenivorans (strain CJ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + +  ++I N +G RTTPS V +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+  +  PAD     +  +G  K+ +A+++S+ +L KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GRIIGIDLGTTNSCVSIMEGNTPRVIENSEGARTTPSIVAYQEDGEVLVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDIGLMPYSIV--PADNGDAWIEVRG--KKLSAQQVSADILRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_LEPCP (Chaperone protein dnaK OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V + +  ++I N +G RTTPS + +  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D+ L P+K  A  AD     V  +G  K+ A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGNTTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPRNTLYAVKRLIGRKFTEKEVQKDIDLMPYKIAA--ADNGDAWVEVRG--KRMAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CHLAB (Chaperone protein dnaK OS=Chlamydophila abortus GN=dnaK PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 65/144 (45.14%), Postives = 89/144 (61.81%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +  + ++I + +G RTTPS V F   E L+G  AK Q   NP  T+   KR IGR++S+  V+ ++K  P++  +G     +  +    + KQF  EEI + VLIKM+E AEAYLG  +  AV+TVPAY
Sbjct:   11 IGIDLGTTNSCVSVMEGGQAKVIVSSEGTRTTPSIVAFKGNETLVGIPAKRQAVTNPAKTLASTKRFIGRKYSE--VESEIKTVPYQVASGSNGDVVFPI----DGKQFTPEEIGAQVLIKMKETAEAYLGEPVTEAVITVPAY 148          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURCH (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain HI2424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURCC (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURCA (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 68/148 (45.95%), Postives = 89/148 (60.14%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +    ++I N +G RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR F D   + D+ L P+K    P     +    + + K ++  +IS+ +L KM+E AE+YLG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTTPKVIENAEGARTTPSIVAFTDDGERLVGQPAKRQGVTNPERTFFAIKRLIGRTFEDPMTKKDIGLVPYKITKAPNGDAWV----EADGKPYSPSQISAFILQKMKETAESYLGQPVSQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7E_YEAST (Heat shock protein SSC3, mitochondrial OS=Saccharomyces cerevisiae GN=ECM10 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT S V + +    +II N +G+RTTPS V FT D ERL+G+ AK Q  +N  NT+F  KRLIGRRF D  VQ D+   PFK +        +    +   + ++  +I   +L KM+E AEAYL  ++ NAVVTVPAY
Sbjct:   30 IGIDLGTTNSAVAIMEGKVPRIIENAEGSRTTPSVVAFTKDGERLVGEPAKRQSVINSENTLFATKRLIGRRFEDAEVQRDINQVPFKIVKHSNGDAWV----EARNRTYSPAQIGGFILNKMKETAEAYLAKSVKNAVVTVPAY 170          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFA (Chaperone protein dnaK OS=Xylella fastidiosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SC+ + +  + ++I N +G+RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K          +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADAKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAY 146          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSEF51.991e-2743.92Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_POLNA1.991e-2744.59Chaperone protein dnaK OS=Polaromonas naphthaleniv... [more]
DNAK_LEPCP1.991e-2746.62Chaperone protein dnaK OS=Leptothrix cholodnii (st... [more]
DNAK_CHLAB1.991e-2745.14Chaperone protein dnaK OS=Chlamydophila abortus GN... [more]
DNAK_BURCH1.991e-2747.30Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCC1.991e-2747.30Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCA1.991e-2747.30Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BEII91.991e-2745.95Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
HSP7E_YEAST2.600e-2746.90Heat shock protein SSC3, mitochondrial OS=Saccharo... [more]
DNAK_XYLFA2.600e-2745.27Chaperone protein dnaK OS=Xylella fastidiosa GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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