CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 66/148 (44.59%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV +    + ++I N +G+RTTPS V +T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D+   P+  +A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DAKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_PSEE4 (Chaperone protein dnaK OS=Pseudomonas entomophila (strain L48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 68/148 (45.95%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V ++   ++I N +G RTTPS + +  D E L+G +AK Q   NP NT+F  KRLIGRRF +  VQ D+KL P+K +        +    +   K  A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVSVLENGTAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLFAVKRLIGRRFDEEVVQKDIKLVPYKIVKASNGDAWV----QASGKDMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_NITHX (Chaperone protein dnaK OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFK-GIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V F+D  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V+ D  L P+K   AG  D  +     + + K ++  +IS+  L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPTVEKDKHLVPYKIAKAGNGDAWV-----EVDGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_CYTH3 (Chaperone protein dnaK OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 64/148 (43.24%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +     +I N +G RTTPS V F +  ER +GD AK Q   NPTNT+   KR +G++FS++  + D   +  +  AG  D P + +     ++Q+  +E+S+M+L KM+  AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGSEAVVIPNSEGKRTTPSIVAFLENGERKVGDPAKRQAITNPTNTISSIKRFMGKKFSESKSEADRATYKLE--AGSNDTPRVRI----ADRQYTPQELSAMILQKMKTTAEEYLGHEVKEAVITVPAY 143          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURCM (Chaperone protein dnaK OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPRNTLFAVKRLIGRRFEEKEVQKDIGLMPYAII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURA4 (Chaperone protein dnaK OS=Burkholderia ambifaria (strain MC40-6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPRNTLFAVKRLIGRRFEEKEVQKDIGLMPYAII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SC+ + +  + ++I N +G+RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K          +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SC+ + +  + ++I N +G+RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K          +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SC+ + +  + ++I N +G+RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K          +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 70/145 (48.28%), Postives = 90/145 (62.07%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTT SCV V +    ++I N +G RTTPS V FT D ERL+G  AK Q   NP  T F  KRLIGRR+ D +V+ D  L P+  +   AD     V   G  K+++  +IS+ VL KM+E AE++LG  +  AV+TVPAY
Sbjct:    5 IGIDLGTTNSCVAVMEGSTPKVIENAEGARTTPSIVAFTEDGERLVGQPAKRQSVTNPERTFFAVKRLIGRRYDDPTVEKDKHLVPYSIVR--ADNGDAWVEADG--KKYSPSQISAFVLQKMKETAESFLGEKVEKAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRM52.600e-2744.59Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_PSEE42.600e-2745.95Chaperone protein dnaK OS=Pseudomonas entomophila ... [more]
DNAK_NITHX2.600e-2746.98Chaperone protein dnaK OS=Nitrobacter hamburgensis... [more]
DNAK_CYTH32.600e-2743.24Chaperone protein dnaK OS=Cytophaga hutchinsonii (... [more]
DNAK_BURCM2.600e-2747.30Chaperone protein dnaK OS=Burkholderia ambifaria (... [more]
DNAK_BURA42.600e-2747.30Chaperone protein dnaK OS=Burkholderia ambifaria (... [more]
DNAK_XYLFT3.396e-2745.27Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM3.396e-2745.27Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF23.396e-2745.27Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XANP23.396e-2748.28Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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