CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURS3 (Chaperone protein dnaK OS=Burkholderia sp. (strain 383) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 69/148 (46.62%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  +   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYTIV--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYSII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_AMOA5 (Chaperone protein dnaK OS=Amoebophilus asiaticus (strain 5a2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 67/150 (44.67%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT---ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V + +   +IAN +G RTTPS V F +    ER +GDAAK Q  +NP NT+   KR +G+R+SD  +  + KL P++   G  D   + +     ++ +  +EIS+M+L KM+  AE YLG T+  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGNEPVVIANSEGKRTTPSVVAFLNEGQGERKVGDAAKRQAIINPQNTISSIKRFMGKRYSD--IAEESKLVPYQLEKGNNDTVRVRIG----DRTYTPQEISAMILQKMKTTAEDYLGTTVKEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS7 (Chaperone protein dnaK OS=Rhodopseudomonas sp. (strain No.7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D  L P+K +        +    + + K ++  ++S+ +L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWV----EADGKTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPT (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D  L P+K +        +    + + K ++  ++S+ +L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWV----EADGKTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPA (Chaperone protein dnaK OS=Rhodopseudomonas palustris GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V      ++I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F  KRLIGRR+ D  V+ D  L P+K +        +    + + K ++  ++S+ +L KM+E AEA+LG  ++ AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWV----EADGKTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +  + ++I N +G RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR + D   Q D  L P+K   G      +    + + K+++  +IS+  L KM+E AE++LG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENSEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPMTQKDKGLVPYKIARGDNGDAWV----EADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 71/149 (47.65%), Postives = 89/149 (59.73%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFK-GIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V +  + ++I N +G RTTPS V FTD  ERL+G  AK Q   NP+ T F  KRLIGR + D   Q D  L P+    AG  D  +       + KQF+  +IS+  L KM+E AE+YLG  +  AV+TVPAY
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYAITRAGNGDAWV-----AADGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_LARHH (Chaperone protein dnaK OS=Laribacter hongkongensis (strain HLHK9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV V ++ + ++I N +G RTTPS V +  D E L+G  AK Q   N  NT+F +KRLIGRRF +  VQ D+ L PF  +   AD     ++ +G  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAVLENGQPKVIENSEGARTTPSVVAYMEDGEILVGAPAKRQAVTNAKNTIFASKRLIGRRFEEKEVQKDIDLMPFSIV--KADNGDAWIDVRG--KKLAPPQISAEVLRKMKKTAEDYLGEEVTEAVITVPAY 145          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: DNAK_BURPS (Chaperone protein dnaK OS=Burkholderia pseudomallei GN=dnaK PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.436e-27
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  140 GPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + + D  E L+G  AK Q   NP NT+F  KRLIGRRF +  VQ D+ L P+  I   AD     V   GE  + A  ++S+ VL KM++ AE YLG  +  AV+TVPAY
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYAII--KADNGDAWVEAHGE--KLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAY 145          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BURS33.396e-2746.62Chaperone protein dnaK OS=Burkholderia sp. (strain... [more]
DNAK_BURCJ3.396e-2747.30Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_AMOA53.396e-2744.67Chaperone protein dnaK OS=Amoebophilus asiaticus (... [more]
DNAK_RHOS74.436e-2744.59Chaperone protein dnaK OS=Rhodopseudomonas sp. (st... [more]
DNAK_RHOPT4.436e-2744.59Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOPA4.436e-2744.59Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METRJ4.436e-2745.27Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK_METNO4.436e-2747.65Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_LARHH4.436e-2747.30Chaperone protein dnaK OS=Laribacter hongkongensis... [more]
DNAK_BURPS4.436e-2747.30Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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