CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.414e-57
Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+ +    DKP + VNYKGE + F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAY
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQ-VVNDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.846e-57
Identity = 108/144 (75.00%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GIDLGTTYSCVGV+ H +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F D +VQ DMK WPFK I+    KP + V YKGE K F  EEISSMVL+KM+E AEA+LG T+ +AVVTVPAY
Sbjct:    7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAY 150          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.846e-57
Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+ +    DKP + VNYKGE + F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAY
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQ-VVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.846e-57
Identity = 110/153 (71.90%), Postives = 122/153 (79.74%), Query Frame = 2
Query:  122 MAGKGEGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            M  K + P +GIDLGTTYSCVGVWQ+DRV+IIANDQGNRTTPSYVGFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ DMK W F  +     KP+  V +KGE K F  EE SSM+L KM+E AEAYLG  +N+AVVTVPAY
Sbjct:    1 MTTKLDSPAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFDDDVVQADMKHWSFT-VVNKNSKPLFQVEFKGETKTFTPEEFSSMILTKMKETAEAYLGTKVNHAVVTVPAY 152          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.846e-57
Identity = 110/148 (74.32%), Postives = 126/148 (85.14%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +G  IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+ +   A KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG ++ NAV+TVPAY
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQ-VINEAGKPKVLVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHSVTNAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 221.861 bits (564), Expect = 1.846e-57
Identity = 110/148 (74.32%), Postives = 125/148 (84.46%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +G  IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+ +   A KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG  + NAV+TVPAY
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQ-VINEAGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNVTNAVITVPAY 151          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 4.113e-57
Identity = 108/148 (72.97%), Postives = 123/148 (83.11%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            + P +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPT T+FDAKRLIGR+F D +VQ DMK WPF+ ++    KP I V YK E+K F  EEISSMVL KM+E AEAYLG T+ NAV+TVPAY
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADG-KPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.113e-57
Identity = 109/144 (75.69%), Postives = 122/144 (84.72%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+ +    DKP + V+YKGE K F  EEISSMVL KM+EIAEAYLG  ++NAV+TVPAY
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQADMKHWPFR-VINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVSNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.372e-57
Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+ +    DKP + V+YKGE K F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAY
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQ-VVNDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.372e-57
Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F D  VQ DMK WPF+ +    DKP + V+YKGE K F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAY
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFR-VINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAY 149          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71A_MOUSE1.414e-5775.69Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP7A_CAEEL1.846e-5775.00Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP71_RAT1.846e-5775.69Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP70_BLAEM1.846e-5771.90Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HS71L_RAT1.846e-5774.32Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MOUSE1.846e-5774.32Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP7D_DROME4.113e-5772.97Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HS71B_PIG4.113e-5775.69Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP71_CANFA5.372e-5775.69Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_BOVIN5.372e-5775.69Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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