CF834899

Overview
NameCF834899
Unique NameCF834899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 7.016e-57
Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ D  +  DMK WPFK +     KP IGV YKGE K+FA EEISSMVL KM+E AEAYLG +I +AV+TVPAY
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFK-VVSDGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 7.016e-57
Identity = 109/144 (75.69%), Postives = 124/144 (86.11%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTD+ERLIGD AKNQVAMNPTNTVFDAKRLIGRRF D SVQ DMK WPF+ +     K  I V YKGE+K F+AEEISSMVL KM+E+AE+YLG T+++AV+TVPAY
Sbjct:    5 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDGAKNQVAMNPTNTVFDAKRLIGRRFDDPSVQSDMKHWPFE-VTQVGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 7.016e-57
Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ D  +  DMK WPFK +     KP IGV YKGE K+FA EEISSMVL KM+E AEAYLG +I +AV+TVPAY
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFK-VVSDGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.163e-57
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF  +     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++ NAV+TVPAY
Sbjct:    5 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFT-VVNDGGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.163e-57
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF  +     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++ NAV+TVPAY
Sbjct:    5 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFT-VVNDCGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.163e-57
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV F+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F D  +Q DMK WPF  +     KP I V +KGE K FA EEISSMVL KM+E AEAYLG ++ NAV+TVPAY
Sbjct:    5 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFT-VVNDCGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAY 147          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.197e-56
Identity = 108/148 (72.97%), Postives = 121/148 (81.76%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTTYSCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTV DA RL GR+F D  VQ DMK WPF  +     +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T++NAV+TVPAY
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLDANRLNGRQFDDGVVQSDMKHWPF-NVINDNSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTVSNAVITVPAY 149          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.197e-56
Identity = 107/146 (73.29%), Postives = 121/146 (82.88%), Query Frame = 2
Query:  143 PPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            P IGIDLGTTYSCVGV+QH  V+IIANDQGNRTTPSYV FTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ D  +  D+K WPFK +     KP IGV YKGE K+FA EEISSMVL+KM+E AEAYLG +I +AV+TVPAY
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGEVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDIKHWPFK-VVSDGGKPKIGVEYKGESKRFAPEEISSMVLVKMKETAEAYLGESITDAVITVPAY 146          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.563e-56
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 2
Query:  149 IGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            IGIDLGTTYSCVGVW+++ V IIANDQGNRTTPSYV FTDTERLIGDAAKNQVA NP NTVFDAKRLIGR+F+++SVQ DMK WPF   +G  +KPMI V+Y+GE+K F  EEISSMVL KM+E AEA+LG +I NAV+TVPAY
Sbjct:   18 IGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVSYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAY 161          
BLAST of CF834899 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.563e-56
Identity = 107/148 (72.30%), Postives = 125/148 (84.46%), Query Frame = 2
Query:  137 EGPPIGIDLGTTYSCVGVWQHDRVQIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQGDMKLWPFKGIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATINNAVVTVPAY 580
            +GP +GIDLGTT+SCVGV+QH +V+IIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D +VQ D+K W FK +     KP I V Y+GE K F+AEEISSMVL+KM+E AEAYLG  +++ V++VPAY
Sbjct:    4 KGPAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDRAVQDDIKHWAFK-VINAGGKPKIEVEYRGETKCFSAEEISSMVLLKMKETAEAYLGKKVSDTVISVPAY 150          
The following BLAST results are available for this feature:
BLAST of CF834899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_DROME7.016e-5773.97Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_SCHMA7.016e-5775.69Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP70_DROME7.016e-5773.97Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP74_ANOAL9.163e-5775.00Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_ANOAL9.163e-5775.00Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL9.163e-5775.00Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP7C_DANRE1.197e-5672.97Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP71_DROSI1.197e-5673.29Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP70_PLACB1.563e-5675.00Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP70_ECHGR1.563e-5672.30Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834899 ID=CF834899; Name=CF834899; organism=Citrus sinensis; type=EST; length=581bp
GCTCTNAATAGTGGATCCCCGGGCTGCAGGGTTTTATTTTCCATTAAGAG
ATCTATTTTTGTTTTTCTTCGCTGTCAAAGCCTTCTACTTTATTCTCCTT
TTCCTTGCTTGAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCACCGAT
CGGCATCGATTTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATG
ACAGAGTCCAGATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCT
TATGTGGGGTTCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAA
CCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCAAAGAGGTTGA
TTGGTAGGAGATTCAGCGATACATCAGTCCAAGGCGATATGAAGCTATGG
CCATTTAAGGGGATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAA
CTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGG
TGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATT
AACAATGCAGTCGTTACTGTCCCTGCTTACT
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