CF834927

Overview
NameCF834927
Unique NameCF834927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2799 contig Csv1_Contig2799:108..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A_SPOFR (Eukaryotic translation initiation factor 5A OS=Spodoptera frugiperda GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 85/142 (59.86%), Postives = 113/142 (79.58%), Query Frame = -3
Query:  280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705
            D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:   13 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A_SPOEX (Eukaryotic translation initiation factor 5A OS=Spodoptera exigua GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 85/142 (59.86%), Postives = 113/142 (79.58%), Query Frame = -3
Query:  280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705
            D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:   13 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.211e-44
Identity = 86/144 (59.72%), Postives = 114/144 (79.17%), Query Frame = -3
Query:  277 ADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 708
            ADAG+S TYP Q   +RKNG++VIKSRPCK+V++STSKTGKHGHAK H V IDIF+GKKLED+ PS+HN +VP V R +YQL+DI +DGF+SL+  +G+TKDD++ P  E L   L+  F EGKDL++T++S+MGEE   + K+
Sbjct:   11 ADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A_CANAL (Eukaryotic translation initiation factor 5A OS=Candida albicans GN=ANB1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.698e-44
Identity = 83/144 (57.64%), Postives = 119/144 (82.64%), Query Frame = -3
Query:  277 ADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 708
            ADAGA+ T+P Q   +RKNG++VIK+RPCK+V++STSKTGKHGHAK H V IDIF+GKKLED+ PS+HN +VP+V+R ++QL+DI +DG++SL+T +G+TKDD+++P  E L  +L+  F EGKDL++T++S+MGEE   + K+
Sbjct:   10 ADAGAALTFPMQCSALRKNGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGE-LGDKLQSEFDEGKDLIVTIISAMGEEAAISYKE 151          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.698e-44
Identity = 86/149 (57.72%), Postives = 117/149 (78.52%), Query Frame = -3
Query:  262 ADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 708
            ADAGAS TYP Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+GKKLED+ PS+HN +VP V R++YQL+DI +DG++SL+T +G TKDD++ P  E L   ++  F EGKDL++T++S+MGEE   + K+  P+S
Sbjct:   11 ADAGASATYPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVTLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFDEGKDLMVTIISAMGEEAAISFKE-APRS 156          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_SCHPO (Eukaryotic translation initiation factor 5A-2 OS=Schizosaccharomyces pombe GN=tif51b PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.524e-44
Identity = 83/143 (58.04%), Postives = 115/143 (80.42%), Query Frame = -3
Query:  277 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 705
            +AGAS T+P Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+G+K ED+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EGKDL++TV+S+MGEE   A +D
Sbjct:   13 EAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFEEGKDLIITVVSAMGEEIALACRD 153          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.603e-44
Identity = 85/142 (59.86%), Postives = 111/142 (78.17%), Query Frame = -3
Query:  280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705
            D+GAS TYP Q   +RKNG++++KSRPCK+VE+STSKTGKHGHAK H VGIDIFS KK EDI PS+HN DVP+V R D QLI IS+D F++L+TE+G+ ++DL++P  E L  QL+  F  GKDL+ TV+ + GEE + A+K
Sbjct:   12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_SCHPO (Eukaryotic translation initiation factor 5A-1 OS=Schizosaccharomyces pombe GN=tif51a PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.012e-44
Identity = 82/143 (57.34%), Postives = 115/143 (80.42%), Query Frame = -3
Query:  277 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 705
            +AGAS T+P Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+G+K ED+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EG+DL++TV+S+MGEE   A +D
Sbjct:   13 EAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFDEGRDLIITVVSAMGEETALACRD 153          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_PONAB (Eukaryotic translation initiation factor 5A-2 OS=Pongo abelii GN=EIF5A2 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.481e-42
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = -3
Query:  280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705
            DAGAS TYP Q   +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_MOUSE (Eukaryotic translation initiation factor 5A-2 OS=Mus musculus GN=Eif5a2 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.481e-42
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = -3
Query:  280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705
            DAGAS TYP Q   +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
The following BLAST results are available for this feature:
BLAST of CF834927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IF5A_SPOFR1.294e-4659.86Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A_SPOEX1.294e-4659.86Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A2_YEAST1.211e-4459.72Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_CANAL2.698e-4457.64Eukaryotic translation initiation factor 5A OS=Can... [more]
IF5A1_YEAST2.698e-4457.72Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A2_SCHPO3.524e-4458.04Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_DROME4.603e-4459.86Eukaryotic translation initiation factor 5A OS=Dro... [more]
IF5A1_SCHPO6.012e-4457.34Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A2_PONAB1.481e-4258.45Eukaryotic translation initiation factor 5A-2 OS=P... [more]
IF5A2_MOUSE1.481e-4258.45Eukaryotic translation initiation factor 5A-2 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834927 ID=CF834927; Name=CF834927; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTTTTTTCAATAACACCCCAATCATATATAAATAACACCCATGA
TTTCTTTCTAACATTATAATTCATTAGAGAAATTGCACTCCATAAATTTT
TTAGCCGCCAATCAAAAGAACTACATATTCCAGGCAGCTTGCAATTCTCA
CCACAAAACACAGACGCTACAAATATTAAAGGCAAACTCTAGATGATTAA
AATATTTTTCCAAAAAACAGATGCAACCAGACACAGAAGATAATCACATA
TCGCGCAACTACGACTTTGGGCCAATATCCTTGAGGGCACAGATCTGCTC
CTCGCCCATTGAAGACATGACAGTCAAAACCAAGTCCTTCCCCTCAGCAA
AACCGTCCTTGAGCTGGGTCAGCAGAGTCTCATCGGTTGGGAGCCTCAGA
TCATCCTTGGTGTTCCCATTTTCAGTCAGCAAACTCACAAATCCATCCTC
AGAAATATCAATCAACTGATAGTCGGTACGGTTGACATGGGGAACATCAC
AGTTATGAGAAGAGGGGACAATATCTTCCAGCTTCTTTCCACTGAAGATA
TCAATTCCAACAAAGTGGCACTTAGCATGACCGTGCTTTCCAGTCTTGGA
GGTGGAGACTTCCACAACCTTGCAGGGACGGCTTTTGATGACGATGTAGC
CGTTCTTACGGATGGTACCAGCTTGCTGTGGGTAAGTCTTGGAGGCTCCG
GCATCGGCCTTTGACTCGA
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