CF834927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_HUMAN (Eukaryotic translation initiation factor 5A-2 OS=Homo sapiens GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.481e-42 Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS TYP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G ++DL+LP E L +++ + G+D+ ++VM +M EE A+K Sbjct: 11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A2_CHICK (Eukaryotic translation initiation factor 5A-2 OS=Gallus gallus GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 3.299e-42 Identity = 82/142 (57.75%), Postives = 110/142 (77.46%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS TYP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE+G ++DL+LP + L +++ F +D+ ++V+S+M EE A+K Sbjct: 11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLPEGD-LGKEIEGKFNANEDVQISVISAMNEECAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.253e-41 Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41 Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41 Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41 Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41 Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39 Identity = 77/142 (54.23%), Postives = 108/142 (76.06%), Query Frame = -3 Query: 280 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 705 DAGAS T+P Q +RKNG++V+K PCK+VE+S SKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G +DLRLP + L +++ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 80/147 (54.42%), Postives = 104/147 (70.75%), Query Frame = -3 Query: 265 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 705 DAGAS TYP Q +RK G++VIK+RPCK+V++STSKTGKHGHAK H V IDIF+GKKLED+ PS+HN DVP+V RTDYQ I ED F+ L+ NG K D+++P E L +++ EGKD + V ++MGEE +K+ K Sbjct: 18 DAGASATYPMQCSALRKGGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162
BLAST of CF834927 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 73/126 (57.94%), Postives = 99/126 (78.57%), Query Frame = -3 Query: 328 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLV 705 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DGF+SLL ++G ++DLRLP E L +++ + G++++ Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYDCGEEII 134 The following BLAST results are available for this feature:
BLAST of CF834927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834927 ID=CF834927; Name=CF834927; organism=Citrus sinensis; type=EST; length=719bpback to top |