CF834928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.216e-36 Identity = 83/159 (52.20%), Postives = 112/159 (70.44%), Query Frame = 3 Query: 54 MSDEEH---HFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 515 MSD+ H HF + D+GA+ T+P+Q +RKN +++IK RPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L Q++D + + + VL V+S++GEE I K Sbjct: 1 MSDDHHDDEHFHT-GDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWK 156
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.572e-35 Identity = 70/145 (48.28%), Postives = 109/145 (75.17%), Query Frame = 3 Query: 81 SKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 515 ++A +GAS T+P Q +RKNG++VIK PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + ++ EGK+ +++V+S++G+E + ++K Sbjct: 13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.278e-33 Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 63 EEHHFESK---ADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 515 E+HH E + A++GA+ T+P+Q +RKN +++I+ RPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + L +++ + + VL V+++ GEE I K Sbjct: 3 EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGD-LGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 108 TYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 443 T P++AG I+ +IVI PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + ++L +G Sbjct: 3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG 113
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13 Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = -1 Query: 135 ANILEGTDLLLAH*RHDSQNQVLPLSKTVLELGQQSLIGWEPQIILGVPIFSQQTHKSILRNINQLIVGTVDMGNITVMRRGDNIFQLLSTEDINSNKVALSMTVLSSLGGGDFHNLAGTAFDDDVAVLT 524 ++ LEG H D +QVL K+ L+ Q W IIL V + Q ++++ N+ QL+ ++D N V+ R IFQLL++EDIN N++ S+TVL+SL G NL + DD+ VL+ Sbjct: 27 SSFLEGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQFTF-WSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLS 154
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 90 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVG 239 D GASKT P+Q +RK G++V+K RPCK+VE+STSKTGKHG AK H VG Sbjct: 3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 102 SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 443 SKTY G ++ +I+I PCK+VE+S +KTGKHG AK H V I + SG K + P +VP + + Q++ I+ D V L+ ++ LP +E L ++L+ G Sbjct: 2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPG 113
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 3 Query: 108 TYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISED 350 T AG I++ YI+I + PC+VVEV SKTGKHG AK VGI + G K +VP+ +VP + + Q+I IS D Sbjct: 3 TRTASAGDIKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTAQVISISGD 83
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12 Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 3 Query: 132 IRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 518 ++K YI+I PCK+VE +TS GKHG AK V + +F GKK P DVP + R Q++ D V L+ +++ P DE L +QL+ G ++ M + G+ +I +K+ Sbjct: 13 LKKGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGD-TVQLMDMETYETFEVQKPEDEELASQLEPG------TMVEYMEAAGKRKIVGIKE 134
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 126 GTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 443 G ++ Y+VI PC+VVE+S +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + EN T D+ PTD ++ +++ G Sbjct: 9 GDLKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPG 113 The following BLAST results are available for this feature:
BLAST of CF834928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834928 ID=CF834928; Name=CF834928; organism=Citrus sinensis; type=EST; length=788bpback to top |