CF834928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 102 SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 443 SKTY G ++ +I+I PC++VE+S +KTGKHG AK H V I +F+G K + P +VP + + Q+I D + E T ++ P+DE L +LK G Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPG 113
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11 Identity = 41/130 (31.54%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 126 GTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 515 G +++ YIVI PC+VVEV+ +KTGKHG AK + + + IF+G K + P +VP + + Q+I D + E T ++ +PT+E + +++K KD + MG ++I +K Sbjct: 9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_KORCO (Translation initiation factor 5A OS=Korarchaeum cryptofilum (strain OPF8) GN=eIF5A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 123 AGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQI 503 AG +RK Y+++ PC+V+EVS SK GKHG AK IF G + I P+ ++P V++ Q+I++ V L+ +L LP D L ++LK G + + SMG+ +I Sbjct: 8 AGDLRKGSYVILDDEPCEVLEVSKSKPGKHGSAKVRVEARGIFDGARRSKIFPADALVEIPIVDKKTAQVINV-YGNVVQLMDLETYETFELPLPEDPELASRLKSG------IEVEYWESMGKRKI 127
BLAST of CF834928 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 40/130 (30.77%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 126 GTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 515 G ++ Y++I PC+VVE++ +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + E+ T DL PT+ ++++++ G AE + S MG +I +K Sbjct: 9 GDLKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPG-AE-----IEYWSVMGRRKIVRVK 131 The following BLAST results are available for this feature:
BLAST of CF834928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834928 ID=CF834928; Name=CF834928; organism=Citrus sinensis; type=EST; length=788bpback to top |