CF834932

Overview
NameCF834932
Unique NameCF834932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10510 contig Csv1_Contig10510:392..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = -3
Query:  371 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYK 730
            DLPHV+ + P    ++ + GDMF  +P ADA   K + H   D+  +K+LK   EA+ +N   GKVII++ ++           +K   DI+M + N  GKERTE ++  L +   FS ++
Sbjct:  227 DLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPAN---GKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFR 344          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = -3
Query:  335 DLPHVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKITPIFGMRSLIE 730
            DLPHV++  P    ++++ GDMF  +P   DA L K + H   DE   ++LK   +A+    E GKV++++ V+             F  D I+++ N  GKER E E+ +L   AGF+ +K T I+     IE
Sbjct:  235 DLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALP---EHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIE 365          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+A+ P    ++ + GDMF  +P ADA   K + H   DE  L  LK   +A+  N   GKVI+++ ++                D++M + N  GKERT+ E+  L   AGF  +++
Sbjct:  230 DLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPEN---GKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEV 348          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P+   ++++ GDMF  +P  DA   K + H   DE  LK LK    A+  N   GKVI+ + ++                D++M + N  GKERTE E+  L   AGF  + +
Sbjct:  231 DLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDN---GKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNV 349          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = -3
Query:  374 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHY 730
            DLPHVV + P    ++++ GDMF  +P  DA   K + H   D   +K LKK  EA+  N   GKVI+ + V+                D++M + N  GKERTE E+  L   +GF  +
Sbjct:  229 DLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPEN---GKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQF 345          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = -3
Query:  374 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHY 730
            DLPHV+ + P    ++++ GDMF  +P  DA   K + H   DE  +K LK   +A+  N   GKVI+ + V+                D++M + N  GKERTE E+  L   AGF  +
Sbjct:  229 DLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQN---GKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQF 345          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    ++++ GDMF  +P  DA   K + H   DE  LK LK      A+  E GKVI+ + ++                D I+++ N  GKERTE E+  L   AGF  +K+
Sbjct:  236 DLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLK---NCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKV 354          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    ++++ GDMF  +P  DA   K + H   DE  LK+LK    A+  +   GKVI+ + ++                D LM + N  GKERTE E+  L   +GF  +K+
Sbjct:  234 DLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDH---GKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKV 352          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = -3
Query:  332 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKIT-PIFGMRSLIEV 730
            DLPHV+ + P    ++++ GDMF  +P  DA   K + H   DE  +K LK   E++    E GKVI+ + ++                D I+++ N  GKERTE E+  L   +GF   K+    FG+ +LIE+
Sbjct:  229 DLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLP---EDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGV-NLIEL 359          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 38/120 (31.67%), Postives = 61/120 (50.83%), Query Frame = -3
Query:  374 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHY 730
            DLPHV+A+      ++++ GDMF+ +P  DA   K + H   D   L++LK   +++  N   GKVI+ + ++                D++M + N  GKERTE E+  L   AGF  +
Sbjct:  222 DLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPEN---GKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGF 338          
The following BLAST results are available for this feature:
BLAST of CF834932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_CAPCH1.262e-1234.71Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
OMT1_ORYSJ2.152e-1233.58Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT2_POPTM2.152e-1233.61Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_PRUDU3.671e-1233.61Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT2_OCIBA6.262e-1235.00Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_OCIBA6.262e-1234.17Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CLABR8.178e-1234.43Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
IEMT_CLABR1.068e-1133.61(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
OMT1_ARATH1.395e-1133.33Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_ZINEL1.395e-1131.67Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834932 ID=CF834932; Name=CF834932; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTAAGCACGATCGTAACTTTATTAGTAAAGATAAAACATAAGAGCA
GATGCTGGAAACAATAACAAAATGCAATATAACATAGTACACACAAATCC
TTTATTCTTAATATATTAAAGGGTGGTCTAGGATATTTAAGTTTCCATCC
CAAAAGACTATAGCATTTTAATTGAGTGACTCATCCTATATTTAAACCCG
TGTGTCACCTCATTTTCTAGTCATTTCGAGACATTTCAACTACTACGCAT
ACATCTTGAACGAAACTTTGCTATTCCATCAAGCAGTACAAGAGACTTGC
GGGAATACTGTTACTCAATTCTTTATGGATAGACTTCAATGAGGGATCTC
ATGCCAAATATAGGTGTTATTTTGTAGTGACTGAACCCAGCGTCGGAGAA
TAGCTTTGCCCATTCACTTTCAGTTCTCTCTTTTCCATTAGCGTTAACGC
TCATCAAAATGTCAAACAAGAACTTTGTTTCGGTTAATTCATGTTCCTCT
TCCTCTGCATTGATAACAATATCTATTATTATGACCTTTCCTCCCTCACC
ATTGCTTGCAATTGCTTCTCTGCGTTTCTTCAGTATCTTCAACCCATCCT
CATCATCTAATCCATGAAAAACCAACTTGAAGAGAAAGGCATCTGCAGGA
GGGATAAACTGAAACATGTCACCTGCTATGTATTTCAAGTTGTCGGCCTC
AGGCAGGTTAGCAACAACATGCGGGAGGTCGA
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