CF834932

Overview
NameCF834932
Unique NameCF834932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10510 contig Csv1_Contig10510:392..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 40/122 (32.79%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P+   ++++ GDMF  +P  DA   K + H   DE  LK LK    A+  N   GKVI+ + ++                D++M + N  GKERTE E+  L   +GF   ++
Sbjct:  231 DLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDN---GKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRV 349          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = -3
Query:  371 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYK 730
            +LPHVV + P    ++++ GDMF  +P  DA   K + H   D+   K+LK   +A+  N   GKVI+ + V+                D++M + N  GKERTE E+  L   AGF  ++
Sbjct:  218 ELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDN---GKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 41/117 (35.04%), Postives = 57/117 (48.72%), Query Frame = -3
Query:  383 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGF 730
            DLPHV+ + P    + ++ GDMF  +P  DA   K + H   D   LK LK   EA+  N   GKVI+ + ++                D++M + N  GKERTE E+  L   AGF
Sbjct:  231 DLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPEN---GKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGF 344          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = -3
Query:  371 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILM-SVNANGKERTESEWAKLFSDAGFSHYK 730
            DL HV+ + P    ++++  DMF  +P ADA   K + H   DE  LK LK   EA+ +N   GKV++ + ++                DI+M + N  GKERTE E+  L   AGF+ ++
Sbjct:  227 DLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPAN---GKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFR 344          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = -3
Query:  383 LKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFDILMSVNANGKERTESEWAKLFSDAGF 688
            LK++AGD F+ +P AD +L KL+     DE   ++LK   +++ SN    K+II+DI++++              DILM    +GK+R+ SEW KLF  +GF
Sbjct:  219 LKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSN---AKIIILDIILDSSKYLNFDT----YLDILMMETLDGKQRSLSEWIKLFEMSGF 313          
BLAST of CF834932 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 39/122 (31.97%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  368 DLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDEDGLKILKKRREAIASNGEGGKVIIIDIVINAXXXXXXXXXTKFLFD-ILMSVNANGKERTESEWAKLFSDAGFSHYKI 730
            DLPHV+ + P    +K++ GDMF  +P  DA   K + H   D+   K LK   +A+ +    GKVI+ + V+                D I+++ N  GKERT+ E+  L   AGF  +++
Sbjct:  232 DLPHVIEDAPPLPGVKHVGGDMFVSVPKGDAIFMKWICHDWSDDHCAKFLKNCYDALPNI---GKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQV 350          
The following BLAST results are available for this feature:
BLAST of CF834932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_ROSCH1.822e-1132.79Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_COFCA1.822e-1133.06Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CATRO1.822e-1135.04Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CAPAN2.379e-1133.88Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
OMT11_DICDI4.059e-1137.25Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
COMT1_EUCGU4.059e-1131.97Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834932 ID=CF834932; Name=CF834932; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTAAGCACGATCGTAACTTTATTAGTAAAGATAAAACATAAGAGCA
GATGCTGGAAACAATAACAAAATGCAATATAACATAGTACACACAAATCC
TTTATTCTTAATATATTAAAGGGTGGTCTAGGATATTTAAGTTTCCATCC
CAAAAGACTATAGCATTTTAATTGAGTGACTCATCCTATATTTAAACCCG
TGTGTCACCTCATTTTCTAGTCATTTCGAGACATTTCAACTACTACGCAT
ACATCTTGAACGAAACTTTGCTATTCCATCAAGCAGTACAAGAGACTTGC
GGGAATACTGTTACTCAATTCTTTATGGATAGACTTCAATGAGGGATCTC
ATGCCAAATATAGGTGTTATTTTGTAGTGACTGAACCCAGCGTCGGAGAA
TAGCTTTGCCCATTCACTTTCAGTTCTCTCTTTTCCATTAGCGTTAACGC
TCATCAAAATGTCAAACAAGAACTTTGTTTCGGTTAATTCATGTTCCTCT
TCCTCTGCATTGATAACAATATCTATTATTATGACCTTTCCTCCCTCACC
ATTGCTTGCAATTGCTTCTCTGCGTTTCTTCAGTATCTTCAACCCATCCT
CATCATCTAATCCATGAAAAACCAACTTGAAGAGAAAGGCATCTGCAGGA
GGGATAAACTGAAACATGTCACCTGCTATGTATTTCAAGTTGTCGGCCTC
AGGCAGGTTAGCAACAACATGCGGGAGGTCGA
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